RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 HIST1H1BP16401 226 aaKnown RBP13.87□□□□□ -0.19
CPSF4-205ENST00000440514 SUPT4H1P63272 117 aaKnown RBP13.87□□□□□ -0.19
CPSF4-205ENST00000440514 TMEM187Q14656 261 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 TMEM268Q5VZI3 342 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 OR1L6Q8NGR2 347 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 RBPMSQ93062 196 aaKnown RBP13.87□□□□□ -0.19
CPSF4-205ENST00000440514 PDCD10Q9BUL8 212 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 RANGRFQ9HD47 186 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-205ENST00000440514 THYN1Q9P016 225 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 PEF1Q9UBV8 284 aaKnown RBP13.87□□□□□ -0.19
CPSF4-205ENST00000440514 PRCDQ00LT1 54 aa13.86□□□□□ -0.19
CPSF4-205ENST00000440514 KLK9Q2XQG4 91 aa13.86□□□□□ -0.19
CPSF4-205ENST00000440514 GPR61Q9BZJ8 451 aa13.86□□□□□ -0.19
CPSF4-205ENST00000440514 KLK9Q9UKQ9 250 aa13.86□□□□□ -0.19
CPSF4-205ENST00000440514 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 ST8SIA3O43173 380 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 BTCP35070 178 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 MFAP2P55001 183 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
CPSF4-205ENST00000440514 MZT2BQ6NZ67 158 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 ZNF429Q86V71 674 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 CENPSQ8N2Z9 138 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 SLC35G3Q8N808 338 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 CCDC140Q96MF4 163 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
CPSF4-205ENST00000440514 TMEM56-RWDD3S4R434 201 aa13.85□□□□□ -0.19
CPSF4-205ENST00000440514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.84□□□□□ -0.19
CPSF4-205ENST00000440514 DUXBA0A1W2PPF3 345 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 BMPR1BO00238 502 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 ZP3P21754 424 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 C9orf66Q5T8R8 295 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 Q6ZRM9 215 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 GPR146Q96CH1 333 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 PLEKHA3Q9HB20 300 aa13.84□□□□□ -0.19
CPSF4-205ENST00000440514 DNAH3Q8TD57 4116 aa13.83□□□□□ -0.19
CPSF4-205ENST00000440514 PPP5D1E7EU14 171 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 NDUFB6O95139 128 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 VAMP1P23763 118 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 LGI3Q8N145 548 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 EEF1AKMT3Q96AZ1 226 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 AURKAIP1Q9NWT8 199 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-205ENST00000440514 CACNG5Q9UF02 275 aa13.83□□□□□ -0.2
CPSF4-205ENST00000440514 PLA2G10O15496 165 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 LYRM1O43325 122 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 WIPF1O43516 503 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 SAP30O75446 220 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 IFNA17P01571 189 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 SYNJ2BPP57105 145 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 EGFEM1PQ0D2K5 195 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 PPP1R1AQ13522 171 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 RPEL1Q2QD12 228 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 SLC25A24Q6NUK1 477 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 CLEC19AQ6UXS0 136 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 OR2C3Q8N628 320 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-205ENST00000440514 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
CPSF4-205ENST00000440514 FLVCR2Q9UPI3 526 aa13.82□□□□□ -0.2
CPSF4-205ENST00000440514 IGHV3-21A0A0B4J1V1 117 aa13.81□□□□□ -0.2
CPSF4-205ENST00000440514 A0A0B4J2A0 478 aa13.81□□□□□ -0.2
CPSF4-205ENST00000440514 HLA-AP01891 365 aaKnown RBP13.81□□□□□ -0.2
CPSF4-205ENST00000440514 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-205ENST00000440514 ERHP84090 104 aaKnown RBP13.81□□□□□ -0.2
CPSF4-205ENST00000440514 KLF5Q13887 457 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-205ENST00000440514 ANKRD55Q3KP44 614 aa13.81□□□□□ -0.2
CPSF4-205ENST00000440514 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
CPSF4-205ENST00000440514 SHPKQ9UHJ6 478 aa13.81□□□□□ -0.2
CPSF4-205ENST00000440514 NXPH3O95157 252 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 SFT2D2O95562 160 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 ARL3P36405 182 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 DEFA1P59665 94 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 DEFA3P59666 94 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 AARDQ4LEZ3 155 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 NMSQ5H8A3 153 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 ACSM6Q6P461 480 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 OR1P1Q8NH06 330 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 OR52E5Q8NH55 327 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 ZNF502Q8TBZ5 544 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 CXorf58Q96LI9 332 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 ZC4H2Q9NQZ6 224 aa13.8□□□□□ -0.2
CPSF4-205ENST00000440514 UPK1BO75841 260 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 GPR183P32249 361 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 SUB1P53999 127 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPSF4-205ENST00000440514 TATDN3Q17R31 274 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
CPSF4-205ENST00000440514 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 LRTM2Q8N967 370 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 ZNF114Q8NC26 417 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 MISP3Q96FF7 219 aa13.79□□□□□ -0.2
CPSF4-205ENST00000440514 TRBV7-1A0A0A6YYK4 115 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 FAM240BA0A1B0GVZ2 78 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 K7EIM0 57 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 SULT1A3P0DMM9 295 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 SULT1A4P0DMN0 295 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 C11orf87Q6NUJ2 197 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 OR9G4Q8NGQ1 327 aa13.78□□□□□ -0.2
CPSF4-205ENST00000440514 COQ8AQ8NI60 647 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms