RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SELENOVP59797 346 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRB3Q04118 309 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 DIAPH2-AS1Q14236 149 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 KRTCAP3Q53RY4 240 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 OR2T6Q8NHC8 308 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 TRAV5A0A0B4J249 113 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 TEX50A0A1B0GTY4 177 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR20EP86478 221 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR20CP86479 221 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR20DP86480 221 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR20BP86481 221 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR20AP86496 221 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 TMEM249Q2WGJ8 235 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 MORN5Q5VZ52 161 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF439Q8NDP4 499 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 PLXNB1O43157 2135 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 RPL29P47914 159 aaKnown RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 KIAA1644Q3SXP7 199 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 LINC00479Q96M42 142 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 MS4A10Q96PG2 267 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 FCN1O00602 326 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 GCGP01275 180 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 CENPWQ5EE01 88 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF503Q96F45 646 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 UHRF2Q96PU4 802 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 MRPL20Q9BYC9 149 aaKnown RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 CD40P25942 277 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 WFDC8Q8IUA0 241 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 NEUROG1Q92886 237 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 SLC45A2Q9UMX9 530 aa11.05□□□□□ -0.64
HERPUD1-204ENST00000439977 LRBAP50851 2863 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 HELTA6NFD8 242 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 UPK2O00526 184 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 CA1P00915 261 aaPredicted RBP11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 APELAP0DMC3 54 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 MGST1P10620 155 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF788Q6ZQV5 615 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 MMD2Q8IY49 270 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 OR1L6Q8NGR2 347 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 H1FXQ92522 213 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 CBLN4Q9NTU7 201 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 IRF2P14316 349 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 GNG4P50150 75 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 DLX1P56177 255 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 PRR31Q5SQ13 230 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 C1orf174Q8IYL3 243 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 CCL17Q92583 94 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 HARBI1Q96MB7 349 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 IL36BQ9NZH7 164 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 RPUSD1Q9UJJ7 312 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 PRNDQ9UKY0 176 aa11.04□□□□□ -0.64
HERPUD1-204ENST00000439977 NAV3Q8IVL0 2385 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 SERF1AO75920 110 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 MT-CO2P00403 227 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 RAB4BP61018 213 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 DNLZQ5SXM8 178 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 C1orf185Q5T7R7 199 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 CMTM2Q8TAZ6 248 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 FAM222BQ8WU58 562 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 SERTAD4Q9NUC0 356 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 GGTLC3B5MD39 225 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 PLAUP00749 431 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 IQCJQ1A5X6 159 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 ST6GALNAC3Q8NDV1 305 aa11.03□□□□□ -0.64
HERPUD1-204ENST00000439977 EREGO14944 169 aa11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 FCN3O75636 299 aa11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 REG1AP05451 166 aa11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 CRISP2P16562 243 aa11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 SLC25A10Q9UBX3 287 aaPredicted RBP11.02□□□□□ -0.64
HERPUD1-204ENST00000439977 A8MXE2 369 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 MKRN2OSH3BPM6 223 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 CCKARP32238 428 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 GATA4P43694 442 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 LINC00310P59036 64 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms