RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CHODLQ9H9P2 273 aa12.57□□□□□ -0.4
APP-208ENST00000439274 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
APP-208ENST00000439274 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
APP-208ENST00000439274 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
APP-208ENST00000439274 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
APP-208ENST00000439274 NBL1P41271 181 aa12.56□□□□□ -0.4
APP-208ENST00000439274 SLC35B1P78383 322 aa12.56□□□□□ -0.4
APP-208ENST00000439274 FXYD3Q14802 87 aa12.56□□□□□ -0.4
APP-208ENST00000439274 RPEL1Q2QD12 228 aa12.56□□□□□ -0.4
APP-208ENST00000439274 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
APP-208ENST00000439274 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
APP-208ENST00000439274 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
APP-208ENST00000439274 A8MXE2 369 aa12.56□□□□□ -0.4
APP-208ENST00000439274 ITGB1BP1O14713 200 aa12.56□□□□□ -0.4
APP-208ENST00000439274 OR7C2O60412 319 aa12.56□□□□□ -0.4
APP-208ENST00000439274 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
APP-208ENST00000439274 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
APP-208ENST00000439274 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
APP-208ENST00000439274 CDKN1AP38936 164 aa12.56□□□□□ -0.4
APP-208ENST00000439274 GNG4P50150 75 aa12.56□□□□□ -0.4
APP-208ENST00000439274 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
APP-208ENST00000439274 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
APP-208ENST00000439274 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
APP-208ENST00000439274 RND1Q92730 232 aa12.56□□□□□ -0.4
APP-208ENST00000439274 GAFA1Q96PS6 74 aa12.56□□□□□ -0.4
APP-208ENST00000439274 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
APP-208ENST00000439274 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
APP-208ENST00000439274 GCM1Q9NP62 436 aa12.56□□□□□ -0.4
APP-208ENST00000439274 EP300Q09472 2414 aaPredicted RBP12.56□□□□□ -0.4
APP-208ENST00000439274 TANC2Q9HCD6 1990 aa12.55□□□□□ -0.4
APP-208ENST00000439274 HELTA6NFD8 242 aa12.55□□□□□ -0.4
APP-208ENST00000439274 GLRXP35754 106 aa12.55□□□□□ -0.4
APP-208ENST00000439274 TCL1AP56279 114 aa12.55□□□□□ -0.4
APP-208ENST00000439274 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
APP-208ENST00000439274 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
APP-208ENST00000439274 OR10W1Q8NGF6 305 aa12.55□□□□□ -0.4
APP-208ENST00000439274 OR9G1Q8NH87 305 aa12.55□□□□□ -0.4
APP-208ENST00000439274 UPK2O00526 184 aa12.55□□□□□ -0.4
APP-208ENST00000439274 TCAPO15273 167 aa12.55□□□□□ -0.4
APP-208ENST00000439274 TPPP2P59282 170 aa12.55□□□□□ -0.4
APP-208ENST00000439274 PRCDQ00LT1 54 aa12.55□□□□□ -0.4
APP-208ENST00000439274 STUMQ69YW2 141 aa12.55□□□□□ -0.4
APP-208ENST00000439274 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
APP-208ENST00000439274 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
APP-208ENST00000439274 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
APP-208ENST00000439274 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
APP-208ENST00000439274 RNF7Q9UBF6 113 aa12.55□□□□□ -0.4
APP-208ENST00000439274 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
APP-208ENST00000439274 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
APP-208ENST00000439274 GGTLC3B5MD39 225 aa12.54□□□□□ -0.4
APP-208ENST00000439274 AREGP15514 252 aa12.54□□□□□ -0.4
APP-208ENST00000439274 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
APP-208ENST00000439274 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
APP-208ENST00000439274 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 KIAA1644Q3SXP7 199 aa12.54□□□□□ -0.4
APP-208ENST00000439274 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
APP-208ENST00000439274 ASCL3Q9NQ33 180 aa12.54□□□□□ -0.4
APP-208ENST00000439274 SLC25A10Q9UBX3 287 aaPredicted RBP12.54□□□□□ -0.4
APP-208ENST00000439274 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
APP-208ENST00000439274 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
APP-208ENST00000439274 ZNF292O60281 2723 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TRAV9-1A0A075B6T8 112 aa12.53□□□□□ -0.4
APP-208ENST00000439274 IGHV1-46P01743 117 aa12.53□□□□□ -0.4
APP-208ENST00000439274 POU2AF1Q16633 256 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TIMM23BQ5SRD1 257 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TPTE2P1Q5T6R2 138 aa12.53□□□□□ -0.4
APP-208ENST00000439274 CORO2AQ92828 525 aa12.53□□□□□ -0.4
APP-208ENST00000439274 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TECRQ9NZ01 308 aaKnown RBP12.53□□□□□ -0.4
APP-208ENST00000439274 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
APP-208ENST00000439274 IGLV3-9A0A075B6K5 115 aa12.53□□□□□ -0.4
APP-208ENST00000439274 SAA1P0DJI8 122 aaPredicted RBP12.53□□□□□ -0.4
APP-208ENST00000439274 SUMO1P63165 101 aaKnown RBP12.53□□□□□ -0.4
APP-208ENST00000439274 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TMEM167BQ9NRX6 74 aa12.53□□□□□ -0.4
APP-208ENST00000439274 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
APP-208ENST00000439274 TRAV5A0A0B4J249 113 aa12.52□□□□□ -0.4
APP-208ENST00000439274 ZNF705AQ6ZN79 300 aaPredicted RBP12.52□□□□□ -0.4
APP-208ENST00000439274 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.4
APP-208ENST00000439274 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
APP-208ENST00000439274 SFXN3Q9BWM7 321 aa12.52□□□□□ -0.4
APP-208ENST00000439274 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.4
APP-208ENST00000439274 GNB4Q9HAV0 340 aa12.52□□□□□ -0.4
APP-208ENST00000439274 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.4
APP-208ENST00000439274 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.41
APP-208ENST00000439274 M0R143 59 aa12.52□□□□□ -0.41
APP-208ENST00000439274 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
APP-208ENST00000439274 OR2T6Q8NHC8 308 aa12.52□□□□□ -0.41
APP-208ENST00000439274 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
APP-208ENST00000439274 NEU1Q99519 415 aa12.52□□□□□ -0.41
APP-208ENST00000439274 RAB9BQ9NP90 201 aa12.52□□□□□ -0.41
APP-208ENST00000439274 NAT8BQ9UHF3 227 aa12.52□□□□□ -0.41
APP-208ENST00000439274 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
APP-208ENST00000439274 TM4SF5O14894 197 aa12.51□□□□□ -0.41
APP-208ENST00000439274 RNASE2P10153 161 aaKnown RBP12.51□□□□□ -0.41
APP-208ENST00000439274 MGST1P10620 155 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms