RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TRGV10A0A0A0MS01 117 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 M0R1X1 148 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 SMPD2O60906 423 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 CYC1P08574 325 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
PCNX3-202ENST00000439247 PRRX1P54821 245 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 ETFRF1Q6IPR1 90 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 GPR6P46095 362 aaPredicted RBP11.15□□□□□ -0.62
PCNX3-202ENST00000439247 Q56UQ5 140 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 LINC00696Q6ZRV3 163 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 Q8IYB0 196 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
PCNX3-202ENST00000439247 ATMQ13315 3056 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 NKX6-3A6NJ46 265 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
PCNX3-202ENST00000439247 GPR12P47775 334 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 RNF24Q9Y225 148 aa11.15□□□□□ -0.62
PCNX3-202ENST00000439247 A0A1W2PN81 502 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 ZNF134P52741 427 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 RHOBP62745 196 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 TNXAQ16473 311 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 MLANAQ16655 118 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 SLC35E4Q6ICL7 350 aa11.15□□□□□ -0.63
PCNX3-202ENST00000439247 BOKQ9UMX3 212 aaPredicted RBP11.15□□□□□ -0.63
PCNX3-202ENST00000439247 ICE1Q9Y2F5 2266 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 C21orf140B9A014 251 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 C9JCJ5 164 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 MPDU1O75352 247 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 WISP2O76076 250 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 BCL2L2Q92843 193 aaPredicted RBP11.14□□□□□ -0.63
PCNX3-202ENST00000439247 C11orf52Q96A22 123 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 SSBP4Q9BWG4 385 aaPredicted RBP11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TTTY12Q9BZ98 90 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 SVILO95425 2214 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 A6NJY4 79 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 M0QZ24 198 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 ZNF439Q8NDP4 499 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 C22orf15Q8WYQ4 148 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TMEM140Q9NV12 185 aa11.14□□□□□ -0.63
PCNX3-202ENST00000439247 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
PCNX3-202ENST00000439247 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 TMEM11P17152 192 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 CD24P25063 80 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 TMEM251Q8N6I4 163 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 GNG12Q9UBI6 72 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 COX11Q9Y6N1 276 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
PCNX3-202ENST00000439247 OR7C2O60412 319 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 LYZL6O75951 148 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 SP1P08047 785 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 APCSP02743 223 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 IGLL1P15814 213 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 USF1P22415 310 aaPredicted RBP11.13□□□□□ -0.63
PCNX3-202ENST00000439247 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 IBA57Q5T440 356 aaKnown RBP11.13□□□□□ -0.63
PCNX3-202ENST00000439247 NEUROG1Q92886 237 aa11.13□□□□□ -0.63
PCNX3-202ENST00000439247 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
PCNX3-202ENST00000439247 NKX2-8O15522 239 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 AGFG2O95081 481 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 LINC00869P0C866 280 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 STUMQ69YW2 141 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 CLEC5AQ9NY25 188 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 AMY1AP04745 511 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 RPL8P62917 257 aaKnown RBP11.12□□□□□ -0.63
PCNX3-202ENST00000439247 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 MORN5Q5VZ52 161 aa11.12□□□□□ -0.63
PCNX3-202ENST00000439247 SAA2-SAA4A0A096LPE2 208 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 TIGITQ495A1 244 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 CD177Q8N6Q3 437 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 KLF14Q8TD94 323 aaPredicted RBP11.11□□□□□ -0.63
PCNX3-202ENST00000439247 DEFB127Q9H1M4 99 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms