RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 MBP02144 154 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 COL8A2P25067 703 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 Q8N7P7 452 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 C17orf112F2Z3M2 114 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM178BH3BS89 294 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 MYOD1P15172 320 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 PSMB3P49720 205 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 ZNF672Q499Z4 452 aaPredicted RBP11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM106BQ9NUM4 274 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 TCF19Q9Y242 345 aa11.35□□□□□ -0.59
PTCHD3-201ENST00000438700 IL3RAP26951 378 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 CNN1P51911 297 aaKnown RBP11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 MUC15Q8N387 334 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 IGSF10Q6WRI0 2623 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 CDC34P49427 236 aaPredicted RBP11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 HINT2Q9BX68 163 aa11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 PATZ1Q9HBE1 687 aaKnown RBP11.34□□□□□ -0.59
PTCHD3-201ENST00000438700 A0A0U1RQK1 487 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 NKX6-3A6NJ46 265 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 KIR2DS2P43631 304 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 UBE2G2P60604 165 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF114Q8NC26 417 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 IDI2-AS1Q9NZ38 188 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 C15orf61A6NNL5 157 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 PPIAL4DF5H284 164 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 M0R143 59 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 RPP30P78346 268 aaKnown RBP11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF705AQ6ZN79 300 aaPredicted RBP11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF439Q8NDP4 499 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 FAM216AQ8WUB2 273 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 RAB9BQ9NP90 201 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 PPIAL4AQ9Y536 164 aa11.33□□□□□ -0.6
PTCHD3-201ENST00000438700 CFAP46Q8IYW2 2715 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 USP24Q9UPU5 2620 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF705FA8MVS1 300 aaPredicted RBP11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 NPSP0C0P6 89 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 HNF1AP20823 631 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 C21orf62-AS1Q17RA5 79 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 OR52E5Q8NH55 327 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 NCOR1P1Q9H4R4 102 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 THBS3P49746 956 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 RAB4BP61018 213 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 C1orf194Q5T5A4 169 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 ITLN2Q8WWU7 325 aaPredicted RBP11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 MGST2Q99735 147 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
PTCHD3-201ENST00000438700 LRBAP50851 2863 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 RAB4AP20338 218 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 ATP5G3P48201 142 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 RPL15P61313 204 aaKnown RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 MANBALQ9NQG1 85 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 CCL3L1P16619 93 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 PDLIM3Q53GG5 364 aaPredicted RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 MS4A10Q96PG2 267 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 RPUSD1Q9UJJ7 312 aaKnown RBP11.31□□□□□ -0.6
PTCHD3-201ENST00000438700 CACNA1BQ00975 2339 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 A0A1W2PPV4 95 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms