RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 MRPL20Q9BYC9 149 aaKnown RBP13.34□□□□□ -0.27
PTPN13-204ENST00000436978 GPR183P32249 361 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 ICAM4Q14773 271 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 LRTM2Q8N967 370 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 OR13A1Q8NGR1 328 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 ITLN2Q8WWU7 325 aaPredicted RBP13.34□□□□□ -0.27
PTPN13-204ENST00000436978 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 PRSS22Q9GZN4 317 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 HEATR5AQ86XA9 2040 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 LEPP41159 167 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 H0YL77 283 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 F12P00748 615 aaPredicted RBP13.34□□□□□ -0.27
PTPN13-204ENST00000436978 LINC00271P0C7V0 271 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 SEMA5BQ9P283 1151 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 DIDO1Q9BTC0 2240 aaKnown RBP13.34□□□□□ -0.27
PTPN13-204ENST00000436978 SPTA1P02549 2419 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 ZNF250P15622 560 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 MEIG1Q5JSS6 88 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 RPRMQ9NS64 109 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 IGFBP3P17936 291 aaPredicted RBP13.33□□□□□ -0.27
PTPN13-204ENST00000436978 SRIP30626 198 aa13.33□□□□□ -0.27
PTPN13-204ENST00000436978 IFITM3Q01628 133 aa13.33□□□□□ -0.27
PTPN13-204ENST00000436978 TMEM133Q9H2Q1 129 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 IGHV3-23P01764 117 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 GPR61Q9BZJ8 451 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 TAS2R60P59551 318 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 C1QL2Q7Z5L3 287 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 TNFRSF14Q92956 283 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 DOCK11Q5JSL3 2073 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 SAA2-SAA4A0A096LPE2 208 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 H7C2G1 150 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 PEX7O00628 323 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 SAA2P0DJI9 122 aaPredicted RBP13.33□□□□□ -0.28
PTPN13-204ENST00000436978 CCL1P22362 96 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 WDR82Q6UXN9 313 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 TIMP3P35625 211 aa13.33□□□□□ -0.28
PTPN13-204ENST00000436978 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
PTPN13-204ENST00000436978 CLEC19AQ6UXS0 136 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 FLVCR1-AS1Q8TAF5 88 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 TGIF2-C20orf24A0A0A6YYL0 155 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 H3BRM9 83 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 NPIPB7O75200 414 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-204ENST00000436978 IGKV1D-43A0A0B4J1Z2 117 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 AICDAQ9GZX7 198 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 CIARTQ8N365 385 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-204ENST00000436978 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
PTPN13-204ENST00000436978 MRPL13Q9BYD1 178 aaKnown RBP13.32□□□□□ -0.28
PTPN13-204ENST00000436978 LEMD1Q68G75 181 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 PVRIGQ6DKI7 326 aa13.32□□□□□ -0.28
PTPN13-204ENST00000436978 COTL1Q14019 142 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 LOC107984156A0A0G2JMH3 177 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 C17orf98A8MV24 154 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 ARL17AQ8IVW1 177 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 NHLRC3Q5JS37 347 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 SCGB1A1P11684 91 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
PTPN13-204ENST00000436978 C20orf204Q6ZNR8 217 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 FAM131CQ96AQ9 280 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 ZNF25P17030 456 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-204ENST00000436978 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPN13-204ENST00000436978 TBR1Q16650 682 aa13.31□□□□□ -0.28
PTPN13-204ENST00000436978 IGFBP2P18065 325 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 CD59P13987 128 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 ZNF506Q5JVG8 444 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 OR10S1Q8NGN2 331 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 C7orf71A4D174 169 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 DNAL4O96015 105 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 STHQ8IWL8 128 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 CRIPAKQ8N1N5 446 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 TRBV6-7A0A0A0MS04 114 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 MSGN1A6NI15 193 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 TMEM167AQ8TBQ9 72 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 IGHV1-18A0A0C4DH31 117 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-204ENST00000436978 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
PTPN13-204ENST00000436978 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 LDLRAD2Q5SZI1 272 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 LINC01587Q99440 93 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 ATP5LO75964 103 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 MORN2Q502X0 79 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 WBP1Q96G27 269 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 RCC1LQ96I51 464 aaKnown RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 WNT10AQ9GZT5 417 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 IGHV3-66A0A0C4DH42 116 aa13.29□□□□□ -0.28
PTPN13-204ENST00000436978 SAA1P0DJI8 122 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-204ENST00000436978 C18orf12Q96KH6 178 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms