RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 WT1-ASQ06250 92 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 KLK9Q2XQG4 91 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 ZNF429Q86V71 674 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 FAM219AQ8IW50 185 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 OR1L6Q8NGR2 347 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 MRAPQ8TCY5 172 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 CXorf58Q96LI9 332 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 OR4C12Q96R67 309 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 KLK9Q9UKQ9 250 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 NAP1L6A6NFF2 107 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 DBX1A6NMT0 343 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 CDS2O95674 445 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 TRBV12-3P01733 135 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 ANXA3P12429 323 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 AKR1C4P17516 323 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 KRTAP10-11P60412 298 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
COL28A1-203ENST00000435823 PRCDQ00LT1 54 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 TMEM268Q5VZI3 342 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 SLC25A24Q6NUK1 477 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 ACSM6Q6P461 480 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 TMED4Q7Z7H5 227 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 SLC35G3Q8N808 338 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 GLYATL2Q8WU03 294 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 RBPMSQ93062 196 aaKnown RBP8.79□□□□□ -1
COL28A1-203ENST00000435823 TMEM230Q96A57 120 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 SLC25A21Q9BQT8 299 aaPredicted RBP8.79□□□□□ -1
COL28A1-203ENST00000435823 PLEKHA3Q9HB20 300 aa8.79□□□□□ -1
COL28A1-203ENST00000435823 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
COL28A1-203ENST00000435823 TRBV7-1A0A0A6YYK4 115 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 PIGBOS1A0A0B4J2F0 54 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 CENPXA8MT69 81 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 BMPR1BO00238 502 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 GGCTO75223 188 aaKnown RBP8.78□□□□□ -1
COL28A1-203ENST00000435823 IFNA17P01571 189 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 IGHV3-23P01764 117 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 P0C879 139 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 ARL3P36405 182 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 SYNJ2BPP57105 145 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 KLF5Q13887 457 aaPredicted RBP8.78□□□□□ -1
COL28A1-203ENST00000435823 BAK1Q16611 211 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 CLEC19AQ6UXS0 136 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 SELENOHQ8IZQ5 122 aaKnown RBP8.78□□□□□ -1
COL28A1-203ENST00000435823 OR9G4Q8NGQ1 327 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 LHFPL5Q8TAF8 219 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 IL22RA2Q969J5 263 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 GALNT14Q96FL9 552 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 ENY2Q9NPA8 101 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 PEMTQ9UBM1 199 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 S4R3C0 116 aa8.78□□□□□ -1
COL28A1-203ENST00000435823 A0A0B4J293 547 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 MFSD2BA6NFX1 497 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 PPP5D1E7EU14 171 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 SRPXP78539 464 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 TMEM187Q14656 261 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 LGI3Q8N145 548 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 OR2C3Q8N628 320 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 OR1P1Q8NH06 330 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 VN1R17PQ8TDU5 208 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 CCDC140Q96MF4 163 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 TMEM56-RWDD3S4R434 201 aa8.77□□□□□ -1.01
COL28A1-203ENST00000435823 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 ST8SIA3O43173 380 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 LY86O95711 162 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 CLEC3BP05452 202 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 IL7P13232 177 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 SNCAP37840 140 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 HOXA1P49639 335 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 DCTN2Q13561 401 aaKnown RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 RBMS2Q15434 407 aaKnown RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 CNPY1Q3B7I2 92 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 TMEM128Q5BJH2 165 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 LINC00299Q6ZSB3 139 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 CENPSQ8N2Z9 138 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 ZNF114Q8NC26 417 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 C7orf50Q9BRJ6 194 aaKnown RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 CACFD1Q9UGQ2 172 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 ZNF256Q9Y2P7 627 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-203ENST00000435823 DMRT1Q9Y5R6 373 aa8.76□□□□□ -1.01
COL28A1-203ENST00000435823 A0A0B4J2A0 478 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 A0A0G2JRQ6 117 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 WI2-2373I1.2A0A1W2PRP0 233 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 A6NHS1 94 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 INS-IGF2F8WCM5 200 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 K7EIL1 84 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 OR2C1O95371 312 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 VAMP1P23763 118 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 GPR183P32249 361 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.01
COL28A1-203ENST00000435823 MFAP2P55001 183 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 SPCS3P61009 180 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 SUPT4H1P63272 117 aaKnown RBP8.75□□□□□ -1.01
COL28A1-203ENST00000435823 FAM106AQ4KMX7 169 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 PLET1Q6UQ28 207 aa8.75□□□□□ -1.01
COL28A1-203ENST00000435823 OR52E5Q8NH55 327 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms