RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 AANATQ16613 207 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 C9orf139Q6ZV77 190 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 MRPL41Q8IXM3 137 aaKnown RBP8.96□□□□□ -0.98
LINC00539-203ENST00000434601 TMEM217Q8N7C4 229 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 SLC24A4Q8NFF2 622 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 OR1S2Q8NGQ3 325 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 SSX3Q99909 188 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 PAIP2BQ9ULR5 123 aaKnown RBP8.96□□□□□ -0.98
LINC00539-203ENST00000434601 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 MDFIC2A0A1B0GVS7 189 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 IFNA10P01566 189 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 OR8U8P0C7N1 319 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 NPY1RP25929 384 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 HBG1P69891 147 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 HBG2P69892 147 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 SSBP2P81877 361 aaPredicted RBP8.95□□□□□ -0.98
LINC00539-203ENST00000434601 CLINT1Q14677 625 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 RBMS3Q6XE24 437 aaKnown RBP8.95□□□□□ -0.98
LINC00539-203ENST00000434601 HAPLN4Q86UW8 402 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 Q8N9W7 124 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 OR5C1Q8NGR4 320 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
LINC00539-203ENST00000434601 ST8SIA2Q92186 375 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 SLC25A33Q9BSK2 321 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 MOB4Q9Y3A3 225 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 U3KQ87 197 aa8.95□□□□□ -0.98
LINC00539-203ENST00000434601 A0A1B0GW64 132 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 PMS2P5A8MQ11 134 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 E7EUB6 86 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 H3BUX3 64 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 FCN1O00602 326 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 RGS13O14921 159 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 WIPF1O43516 503 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 TPT1P13693 172 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 HTR2BP41595 481 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 RAB11AP62491 216 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 EIF5AP63241 154 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 ERHP84090 104 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 SLC38A11Q08AI6 406 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 ARL16Q0P5N6 197 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 FOXL1Q12952 345 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF266Q14584 549 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 DEFB112Q30KQ8 113 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 RPL7L1Q6DKI1 246 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 OR8G2PQ6IF36 304 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 BCL6BQ8N143 479 aaPredicted RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 LILRB2Q8N423 598 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 OR10W1Q8NGF6 305 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 PIFOQ8TCI5 191 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 RBM14Q96PK6 669 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 ATP5SQ99766 215 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
LINC00539-203ENST00000434601 WFDC1Q9HC57 220 aa8.94□□□□□ -0.98
LINC00539-203ENST00000434601 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 IGLC7A0M8Q6 106 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 A6NDX4 124 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 DFFBO76075 338 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 JTBO76095 146 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 CNIH1O95406 144 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 CFDP00746 253 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-203ENST00000434601 HLA-DRB1P01911 266 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 RNASE2P10153 161 aaKnown RBP8.93□□□□□ -0.98
LINC00539-203ENST00000434601 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-203ENST00000434601 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 AWAT1Q58HT5 328 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 TEX261Q6UWH6 196 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 ETV3LQ6ZN32 361 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-203ENST00000434601 TMEM219Q86XT9 240 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 C5orf56Q8N8D9 126 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 UBAC2Q8NBM4 344 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 TMEM170AQ8WVE7 144 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 C22orf15Q8WYQ4 148 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 ARPC1AQ92747 370 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 PINX1Q96BK5 328 aaKnown RBP8.93□□□□□ -0.98
LINC00539-203ENST00000434601 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
LINC00539-203ENST00000434601 FGF16O43320 207 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 IFNA7P01567 189 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 IFNA4P05014 189 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 OR13C7P0DN81 318 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 SNCAP37840 140 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 NDPQ00604 133 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
LINC00539-203ENST00000434601 FXYD3Q14802 87 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 LY6EQ16553 131 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 ATP6V1FQ16864 119 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 SHISA2Q6UWI4 295 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF562Q6V9R5 426 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 C16orf82Q7Z2V1 217 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF114Q8NC26 417 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 ABHD5Q8WTS1 349 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 SSMEM1Q8WWF3 244 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms