RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM182Q6ZP80 229 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 LYZL2Q7Z4W2 148 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 BCL6BQ8N143 479 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 DRAM1Q8N682 238 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 MRGPRFQ96AM1 343 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 WDYHV1Q96HA8 205 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF835Q9Y2P0 537 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 FAM223BA6NKX1 122 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SLC25A16P16260 332 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 RPL27AP46776 148 aaKnown RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 FAM223AQ8IWN6 122 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 OR1N2Q8NGR9 330 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 Q8WTZ3 238 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM170AQ8WVE7 144 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00052Q96N35 136 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 WFDC6Q9BQY6 131 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 AP5S1Q9NUS5 200 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 IDI2-AS1Q9NZ38 188 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 MUC4Q99102 2169 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 PRR32B1ATL7 298 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 RD3LP0DJH9 198 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 RHOGP84095 191 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00696Q6ZRV3 163 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 OTORQ9NRC9 128 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CCL28Q9NRJ3 127 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 BCL3P20749 454 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 DDTP30046 118 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 GUSBP1Q15486 140 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM171Q8WVE6 324 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ONECUT1Q9UBC0 465 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SRP19P09132 144 aaKnown RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 OR5AU1Q8NGC0 362 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 JMJD8Q96S16 334 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SLC25A2Q9BXI2 301 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SRXN1Q9BYN0 137 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 IFI27L2Q9H2X8 130 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF705GA8MUZ8 300 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CNIH1O95406 144 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF600Q6ZNG1 722 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CRISP2P16562 243 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 EGR1P18146 543 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CD40P25942 277 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 PDLIM4P50479 330 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ARF6P62330 175 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CD69Q07108 199 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 NBR2O15453 112 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SPRY1O43609 319 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF788Q6ZQV5 615 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 HMGN2P46Q86SG4 172 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 HINT2Q9BX68 163 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 GPR61Q9BZJ8 451 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 TRAPPC1Q9Y5R8 145 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 SAA2-SAA4A0A096LPE2 208 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ATP5LO75964 103 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 AMTP48728 403 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 HIST1H1AQ02539 215 aaPredicted RBP3.14□□□□□ -1.91
SHPRH-205ENST00000433355 FOXE3Q13461 319 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 COL5A1-AS1Q5SY13 56 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CA5BP1Q8WTZ4 195 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 RNF126Q9BV68 326 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ARRDC1-AS1Q9H2J1 176 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 MTCH1Q9NZJ7 389 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 NCBP2LA6PVI3 153 aaKnown RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 HLA-DRB4P13762 266 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 RPS16P62249 146 aaKnown RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 SPNS3Q6ZMD2 512 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 C9orf139Q6ZV77 190 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 OLIG3Q7RTU3 272 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 CBLN4Q9NTU7 201 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 HLA-DRB4X5D2U9 266 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 SHISA7A6NL88 538 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 CIDEAO60543 219 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 NHLH2Q02577 135 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 ORMDL2Q53FV1 153 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 METTL26Q96S19 204 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 PRDM13Q9H4Q3 707 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 SDF2L1Q9HCN8 221 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 MRPS16Q9Y3D3 137 aaKnown RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00869P0C866 280 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 CRYBA4P53673 196 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 HERVK_113P61574 105 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 PIGYQ3MUY2 71 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 TEX38Q6PEX7 206 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 MYPOPQ86VE0 399 aaPredicted RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 LSM4Q9Y4Z0 139 aaKnown RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 ARL3P36405 182 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 PPP1CCP36873 323 aaKnown RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 PDCD1Q15116 288 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 TINAGQ9UJW2 476 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 PSG2P11465 335 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 CD59P13987 128 aa3.13□□□□□ -1.91
SHPRH-205ENST00000433355 ELLP55199 621 aaPredicted RBP3.13□□□□□ -1.91
SHPRH-205ENST00000433355 WDFY1Q8IWB7 410 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms