RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 KPRPQ5T749 579 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 C9orf66Q5T8R8 295 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 CTRB2Q6GPI1 263 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF343Q6P1L6 599 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 CLEC19AQ6UXS0 136 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMED4Q7Z7H5 227 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 HAPLN4Q86UW8 402 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SGPP2Q8IWX5 399 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SELENOHQ8IZQ5 122 aaKnown RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 GDPD1Q8N9F7 314 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 NECAP1Q8NC96 275 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR1L8Q8NGR8 309 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 MRAPQ8TCY5 172 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM56Q96MV1 263 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR4C12Q96R67 309 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SRRQ9GZT4 340 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 NAA60Q9H7X0 242 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 NDUFA4L2Q9NRX3 87 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 FKBP11Q9NYL4 201 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 PRNDQ9UKY0 176 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF257Q9Y2Q1 563 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 KCNIP3Q9Y2W7 256 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SELENOKQ9Y6D0 94 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 TNCP24821 2201 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGLV11-55A0A075B6I3 123 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 A0A0B4J293 547 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGHV3-35A0A0C4DH35 117 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 A0A0G2JRQ6 117 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGLC7A0M8Q6 106 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 MFSD2BA6NFX1 497 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 CRYM-AS1A6NIL9 109 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 FAM223BA6NKX1 122 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF561-AS1K7EIQ3 104 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 ATG12O94817 140 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 BRI3O95415 125 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 CDS2O95674 445 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 LY86O95711 162 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 IFNA17P01571 189 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 CLEC3BP05452 202 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 HIST1H1BP16401 226 aaKnown RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 UCP1P25874 307 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 PTBP1P26599 531 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 FAUP35544 74 aaKnown RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 ARL3P36405 182 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 CCR6P51684 374 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 MFAP2P55001 183 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 AP3S2P59780 193 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 HSPE1P61604 102 aaKnown RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 DHODHQ02127 395 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TATDN3Q17R31 274 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 CNPY1Q3B7I2 92 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM268Q5VZI3 342 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRIQKQ629K1 86 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 Q6ZRM9 215 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 FAM223AQ8IWN6 122 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 GLYATL2Q8WU03 294 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 LSM10Q969L4 123 aaKnown RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM230Q96A57 120 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 EEF1AKMT3Q96AZ1 226 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 GPR146Q96CH1 333 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 RRNAD1Q96FB5 475 aaKnown RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 SCGB3A2Q96PL1 93 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 PRR25Q96S07 402 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TSC22D3Q99576 134 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 SDHCQ99643 169 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 PDCD10Q9BUL8 212 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM222Q9H0R3 208 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 FAM212BQ9NTI7 297 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 THYN1Q9P016 225 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 DMRT1Q9Y5R6 373 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
HMGB3P24-201ENST00000433260 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF320A2RRD8 509 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 K7EIL1 84 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 BMPR1BO00238 502 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ST8SIA3O43173 380 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGHV3-48P01763 117 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 SPNP16150 400 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 EDN2P20800 178 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZP3P21754 424 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 SNCAP37840 140 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ERHP84090 104 aaKnown RBP4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 PRCDQ00LT1 54 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM187Q14656 261 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 XP32Q5T750 250 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ACSM6Q6P461 480 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 LYZL2Q7Z4W2 148 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC35G3Q8N808 338 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR5B3Q8NH48 314 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms