RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TET2Q6N021 2002 aaPredicted RBP10.41□□□□□ -0.74
DDX56-204ENST00000431640 ROS1P08922 2347 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
DDX56-204ENST00000431640 PDE6DO43924 150 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 YIF1AO95070 293 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 MT-CO2P00403 227 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 GPX4P36969 197 aaPredicted RBP10.4□□□□□ -0.74
DDX56-204ENST00000431640 SUB1P53999 127 aaKnown RBP eCLIP10.4□□□□□ -0.74
DDX56-204ENST00000431640 RHOBP62745 196 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 MRPL41Q8IXM3 137 aaKnown RBP10.4□□□□□ -0.74
DDX56-204ENST00000431640 C11orf42Q8N5U0 333 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 NEU4Q8WWR8 484 aaPredicted RBP10.4□□□□□ -0.74
DDX56-204ENST00000431640 SMIM7Q9BQ49 75 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 C19orf24Q9BVV8 132 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 CBLN4Q9NTU7 201 aa10.4□□□□□ -0.74
DDX56-204ENST00000431640 NBPF19A0A087WUL8 3843 aa10.4□□□□□ -0.75
DDX56-204ENST00000431640 F6UZH7 168 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 CLDN34H7C241 214 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 PAGE4O60829 102 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 STAG3L2P0CL84 134 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 STAG3L3P0CL85 134 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 B2MP61769 119 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
DDX56-204ENST00000431640 MIC13Q5XKP0 118 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 HIST2H2BCQ6DN03 193 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 OR8B3Q8NGG8 313 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 C8orf46Q8TAG6 207 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 TIMD4Q96H15 378 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 SLC35E1Q96K37 410 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 OR8B2Q96RD0 313 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 TGOLN2O43493 480 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 S100A6P06703 90 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 RNASE2P10153 161 aaKnown RBP10.39□□□□□ -0.75
DDX56-204ENST00000431640 MYOD1P15172 320 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 REG1BP48304 166 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 TEX45Q8NA69 505 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 C1orf159Q96HA4 380 aa10.39□□□□□ -0.75
DDX56-204ENST00000431640 PATZ1Q9HBE1 687 aaKnown RBP10.39□□□□□ -0.75
DDX56-204ENST00000431640 AMMECR1Q9Y4X0 333 aaPredicted RBP10.39□□□□□ -0.75
DDX56-204ENST00000431640 PKDREJQ9NTG1 2253 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 ABCA4P78363 2273 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 ARFGEF3Q5TH69 2177 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 CLN5O75503 358 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 VENTXO95231 258 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 OPN1MWP04001 364 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 SOD3P08294 240 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PPIAL4GP0DN37 164 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 OPN1MW2P0DN77 364 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 OPN1MW3P0DN78 364 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 RND2P52198 227 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PRR20EP86478 221 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PRR20CP86479 221 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PRR20DP86480 221 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PRR20BP86481 221 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PRR20AP86496 221 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 ELOBQ15370 118 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 HLA-DRB5Q30154 266 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 PNKDQ8N490 385 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
DDX56-204ENST00000431640 PSMG3-AS1Q96PY0 264 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 CLEC7AQ9BXN2 247 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 SLC45A2Q9UMX9 530 aa10.38□□□□□ -0.75
DDX56-204ENST00000431640 CELSR2Q9HCU4 2923 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
DDX56-204ENST00000431640 IGLV1-47P01700 117 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 CD69Q07108 199 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 ZNF674Q2M3X9 581 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 SPNS3Q6ZMD2 512 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 SSMEM1Q8WWF3 244 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
DDX56-204ENST00000431640 RNF5Q99942 180 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 PARLQ9H300 379 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
DDX56-204ENST00000431640 BUB1B-PAK6H3BSN5 160 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
DDX56-204ENST00000431640 LIPFP07098 398 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 DIAPH2-AS1Q14236 149 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 GAMTQ14353 236 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 CST9LP1Q5W188 147 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 MMD2Q8IY49 270 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 LY6G5BQ8NDX9 201 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
DDX56-204ENST00000431640 GATAD1Q8WUU5 269 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms