RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 S100A10P60903 97 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 RPP30P78346 268 aaKnown RBP8.62□□□□□ -1.03
CHD4-202ENST00000430771 WT1-ASQ06250 92 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 FCN2Q15485 313 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 KHDC1LQ5JSQ8 128 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 TMEM65Q6PI78 240 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 C12orf54Q6X4T0 127 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 Q6ZNX1 250 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 ZNF329Q86UD4 541 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 NOXA1Q86UR1 476 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 OR5AU1Q8NGC0 362 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 WIPF2Q8TF74 440 aaPredicted RBP8.62□□□□□ -1.03
CHD4-202ENST00000430771 RBKSQ9H477 322 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 HEYLQ9NQ87 328 aaPredicted RBP8.62□□□□□ -1.03
CHD4-202ENST00000430771 THYN1Q9P016 225 aa8.62□□□□□ -1.03
CHD4-202ENST00000430771 F11RQ9Y624 299 aaKnown RBP8.62□□□□□ -1.03
CHD4-202ENST00000430771 FAM223BA6NKX1 122 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 SIX6O95475 246 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 IGLV1-40P01703 118 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 TRGV3P03979 118 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 PF4V1P10720 104 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 PSMB8P28062 276 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 TPPP2P59282 170 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 ID3Q02535 119 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 FAM223AQ8IWN6 122 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 RNF152Q8N8N0 203 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 OR5T1Q8NG75 326 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 OR1P1Q8NH06 330 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 RAB40CQ96S21 281 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 RCL1Q9Y2P8 373 aaKnown RBP8.61□□□□□ -1.03
CHD4-202ENST00000430771 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
CHD4-202ENST00000430771 U3KQ87 197 aa8.61□□□□□ -1.03
CHD4-202ENST00000430771 K7EPK0 472 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 L7N2F9 121 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 SOX15O60248 233 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 MBPP02686 304 aaPredicted RBP8.6□□□□□ -1.03
CHD4-202ENST00000430771 GIPP09681 153 aaPredicted RBP8.6□□□□□ -1.03
CHD4-202ENST00000430771 IAPPP10997 89 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 NPY1RP25929 384 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 ATP5IP56385 69 aaPredicted RBP8.6□□□□□ -1.03
CHD4-202ENST00000430771 H2BFSP57053 126 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHD4-202ENST00000430771 VAMP2P63027 116 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 KRTAP21-3Q3LHN1 58 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 C10orf99Q6UWK7 81 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 OR11H7Q8NGC8 314 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
CHD4-202ENST00000430771 MAGT1Q9H0U3 335 aa8.6□□□□□ -1.03
CHD4-202ENST00000430771 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 TSC22D2O75157 780 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 SCAF4O95104 1147 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 IFNA10P01566 189 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 RLN2P04090 185 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 OR8U8P0C7N1 319 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 RNASE2P10153 161 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 CXCL3P19876 107 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 RAB9AP51151 201 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 TAS2R30P59541 319 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 RAB11AP62491 216 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 RHOGP84095 191 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 SRSF4Q08170 494 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 RAB32Q13637 225 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 LRRC37A5PQ49AS3 106 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 C2orf83Q53S99 150 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 NECAP1Q8NC96 275 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 PPP1R1CQ8WVI7 109 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 USMG5Q96IX5 58 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 MS4A10Q96PG2 267 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 P2RX4Q99571 388 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
CHD4-202ENST00000430771 TSSC4Q9Y5U2 329 aaPredicted RBP8.59□□□□□ -1.03
CHD4-202ENST00000430771 TRBV9A0A0B4J1U6 114 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 RPS10-NUDT3A0A1W2PQS6 291 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 TCRBV4S1A1TA0A5B7 111 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 DEDDO75618 318 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 OR2J3O76001 311 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 PRH1P02810 166 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
CHD4-202ENST00000430771 CD28P10747 220 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 RAP2BP61225 183 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 FGL1Q08830 312 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 IL15RAQ13261 267 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 C19orf35Q6ZS72 473 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 C3orf56Q8N813 242 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 MYOZ3Q8TDC0 251 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 CXorf58Q96LI9 332 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 ZNF747Q9BV97 191 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 PSENENQ9NZ42 101 aa8.58□□□□□ -1.04
CHD4-202ENST00000430771 PAIP2BQ9ULR5 123 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms