RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CMTM1Q8IZ96 169 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 MARC2Q969Z3 335 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 BSCL2Q96G97 398 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-203ENST00000430038 GGTLC1Q9BX51 225 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 C21orf62Q9NYP8 219 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 LOC102724200A0A096LPH7 203 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 I3L2K1 104 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 APOA1P02647 267 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 RNASE12Q5GAN4 147 aaKnown RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 OR2C3Q8N628 320 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 UBAC2Q8NBM4 344 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 NDUFA4O00483 81 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 TSPAN4O14817 238 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 SNAPC5O75971 98 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 PI3P19957 117 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 TSPAN5P62079 268 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 ZNF124Q15973 351 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 HSD17B13Q7Z5P4 300 aaPredicted RBP12.67□□□□□ -0.38
CPSF4-203ENST00000430038 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 C20orf24Q9BUV8 137 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 DAZ1Q9NQZ3 744 aaKnown RBP12.67□□□□□ -0.38
CPSF4-203ENST00000430038 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 IGKV1-5P01602 117 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 UCP3P55916 312 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CTF1Q16619 201 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SPSB3Q6PJ21 355 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 OR1P1Q8NH06 330 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 RNF2Q99496 336 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 P0C879 139 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SMIM18P0DKX4 95 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 RCVRNP35243 200 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 Q56UQ5 140 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 LHFPL1Q86WI0 220 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 LILRB2Q8N423 598 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 OR4D10Q8NGI6 311 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 FAM212BQ9NTI7 297 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 A0A0B4J293 547 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 K7EMT4 169 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 PRCDQ00LT1 54 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 MISP3Q96FF7 219 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 TMEM56Q96MV1 263 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 VCX3AQ9NNX9 186 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 FKBP11Q9NYL4 201 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 AGRNO00468 2067 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 SMIM31A0A1B0GVY4 71 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 CHEK1O14757 476 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 MT-CO2P00403 227 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 CD3DP04234 171 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
CPSF4-203ENST00000430038 DEFB135Q30KP9 77 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 APRG1Q8IVJ8 170 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 SLC38A6Q8IZM9 456 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 FRAS1Q86XX4 4008 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV7-4-1A0A0J9YVY3 117 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 CYB5BO43169 146 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 APOHP02749 345 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 FCGR2BP31994 310 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RORCP51449 518 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 ZNF114Q8NC26 417 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MFAP4P55083 255 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 RND3P61587 244 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 MLANAQ16655 118 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 SP6Q3SY56 376 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms