RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 MMDQ15546 238 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 CREBBPQ92793 2442 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.432e-8■■■■■ 31.6
CACTIN-203ENST00000429344 TRGV8A0A0C4DH27 118 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 IGFBP2P18065 325 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 RAB31Q13636 194 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
CACTIN-203ENST00000429344 FAM208BQ5VWN6 2430 aa12.33□□□□□ -0.43
CACTIN-203ENST00000429344 MLNRO43193 412 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
CACTIN-203ENST00000429344 FAM87AP0C7U9 286 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 ZNF146Q15072 292 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
CACTIN-203ENST00000429344 HCFC1P51610 2035 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 IQCF6A8MYZ5 107 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 PRB4P10163 310 aaPredicted RBP12.33□□□□□ -0.44
CACTIN-203ENST00000429344 PDLIM4P50479 330 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 Q6ZN92 141 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 Q6ZVH6 145 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 LYG1Q8N1E2 194 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 OR2V2Q96R30 315 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 WIPI2Q9Y4P8 454 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
CACTIN-203ENST00000429344 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 SRIP30626 198 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 CENPWQ5EE01 88 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 HELTA6NFD8 242 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TMEM210A6NLX4 147 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 K7EN84 100 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TNFSF13O75888 250 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TYMSP04818 313 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
CACTIN-203ENST00000429344 H0Y8G0 127 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 MT-CO2P00403 227 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 WNT2P09544 360 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TNFSF4P23510 183 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 RHOBP62745 196 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 TIGITQ495A1 244 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 Q6ZS92 163 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 ZBTB34Q8NCN2 500 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 CFAP47Q6ZTR5 3102 aa12.32□□□□□ -0.44
CACTIN-203ENST00000429344 CAMPP49913 170 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 ERVK11-1P61568 191 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 RANP62826 216 aaKnown RBP12.31□□□□□ -0.44
CACTIN-203ENST00000429344 MLANAQ16655 118 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 UTF1Q5T230 341 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 ACP7Q6ZNF0 438 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
CACTIN-203ENST00000429344 AKAP13Q12802 2813 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 J3QW42 95 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 NPY1RP25929 384 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 EFNB3Q15768 340 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 TEPPQ6URK8 271 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 IGFL2Q6UWQ7 119 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 RND1Q92730 232 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 DKK4Q9UBT3 224 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 PRDX2P32119 198 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 HINT1P49773 126 aaPredicted RBP12.31□□□□□ -0.44
CACTIN-203ENST00000429344 FOXL1Q12952 345 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 ZNF474Q6S9Z5 364 aaPredicted RBP12.31□□□□□ -0.44
CACTIN-203ENST00000429344 C1orf162Q8NEQ5 155 aaPredicted RBP12.31□□□□□ -0.44
CACTIN-203ENST00000429344 ITLN1Q8WWA0 313 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 NPVFQ9HCQ7 196 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
CACTIN-203ENST00000429344 PLAUP00749 431 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
CACTIN-203ENST00000429344 CCL8P80075 99 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 LCN12Q6JVE5 192 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 CA2P00918 260 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 NBL1P41271 181 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
CACTIN-203ENST00000429344 RBPJQ06330 500 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
CACTIN-203ENST00000429344 SPACA3Q8IXA5 215 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
CACTIN-203ENST00000429344 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 DYNLRB1Q9NP97 96 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 ZNRD1Q9P1U0 126 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 TP53TG3Q9ULZ0 132 aa12.3□□□□□ -0.44
CACTIN-203ENST00000429344 TNFAIP6P98066 277 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms