RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FAM90A1Q86YD7 464 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 SLC25A28Q96A46 364 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 SIGLEC12Q96PQ1 595 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 PRR32B1ATL7 298 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 NBR2O15453 112 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 GCM2O75603 506 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 IGHMP01871 453 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 THBDP07204 575 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 SAA1P0DJI8 122 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 TRAF4Q9BUZ4 470 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 IGHV2OR16-5A0A0B4J2B6 119 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 KBTBD11-OT1A0A1B0GTJ5 212 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 TRGC2P03986 189 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 CSRP3P50461 194 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 Q6AWC8 147 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 CIARTQ8N365 385 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 RFLNBQ8N5W9 214 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 APCDD1LQ8NCL9 501 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 RNASEH2CQ8TDP1 164 aaKnown RBP7.55□□□□□ -1.2
CTNND1-208ENST00000428599 GGACTQ9BVM4 153 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 LINC00312Q9Y6C7 94 aa7.55□□□□□ -1.2
CTNND1-208ENST00000428599 SAP30O75446 220 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 SOD3P08294 240 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 EGR1P18146 543 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 FAM71F2Q6NXP2 309 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 C18orf15Q96N68 181 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 VCX2Q9H322 139 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 ST20Q9HBF5 79 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 GREB1Q4ZG55 1949 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 CHD5Q8TDI0 1954 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 C19orf67A6NJJ6 358 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 THSD7BQ9C0I4 1608 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 KLK2P20151 261 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 CRYBA2P53672 197 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 TMEM86BQ8N661 226 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-208ENST00000428599 DTX1Q86Y01 620 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 SPAG8Q99932 426 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-208ENST00000428599 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-208ENST00000428599 CD33P20138 364 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
CTNND1-208ENST00000428599 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 RFPL3SP0C7P2 107 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 ZNF79Q15937 498 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 FAM169BQ8N8A8 192 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 POC1AQ8NBT0 407 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 OR52E5Q8NH55 327 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 WNT2P09544 360 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 KIAA1644Q3SXP7 199 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 SLC25A15Q9Y619 301 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 TPRP12270 2363 aaKnown RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 AMELYQ99218 206 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 ASCL2Q99929 193 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 MRPL20Q9BYC9 149 aaKnown RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 APOHP02749 345 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 TMEM187Q14656 261 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CYB5R2Q6BCY4 276 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 GPHA2Q96T91 129 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 F8WEM9 126 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 TMEM50AO95807 157 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 NPCDR1Q9BY65 106 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 CST9LQ9H4G1 147 aa7.53□□□□□ -1.2
CTNND1-208ENST00000428599 DNAJC13O75165 2243 aa7.52□□□□□ -1.2
CTNND1-208ENST00000428599 A0A087WX48 190 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 CELA3AP09093 270 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 C2orf68Q2NKX9 166 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 PSMG3Q9BT73 122 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-208ENST00000428599 ANKRD36A6QL64 1941 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 CACNA1EQ15878 2313 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 IGKV1D-42A0A075B6H8 117 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 MSGN1A6NI15 193 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 ERVK11-1P61568 191 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 TBR1Q16650 682 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.21
CTNND1-208ENST00000428599 CCDC88CQ9P219 2028 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 PLA2G10O15496 165 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 C1QL1O75973 258 aa7.52□□□□□ -1.21
CTNND1-208ENST00000428599 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms