RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 TAF15Q92804 592 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMEM68Q96MH6 324 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 DUX5Q96PT3 197 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 HINT2Q9BX68 163 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 C11orf1Q9H5F2 150 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 ESM1Q9NQ30 184 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 MOB4Q9Y3A3 225 aa6.56□□□□□ -1.36
SMARCAL1-206ENST00000427645 KANTRA0A1W2PQU2 76 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMEM89A2RUT3 159 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 FCN1O00602 326 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 CYB5BO43169 146 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 CA2P00918 260 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 IFNA10P01566 189 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 OPN1MWP04001 364 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HKR1P10072 659 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 IAPPP10997 89 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 VDAC2P45880 294 aaPredicted RBP6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HOXA1P49639 335 aaPredicted RBP6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 SULT1A1P50225 295 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HILS1P60008 231 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HBG1P69891 147 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HBG2P69892 147 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMEM267Q0VDI3 215 aaPredicted RBP6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 PJVKQ0ZLH3 352 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 FXYD3Q14802 87 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 MRGPRG-AS1Q2M3A8 158 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 AWAT1Q58HT5 328 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 SPANXN5Q5MJ07 72 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMUB2Q71RG4 321 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 C9orf62Q8N4C0 152 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 GRPEL2Q8TAA5 225 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 SRSF12Q8WXF0 261 aaKnown RBP6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 ARL6Q9H0F7 186 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 HSPB11Q9Y547 144 aa6.55□□□□□ -1.36
SMARCAL1-206ENST00000427645 RNF222A6NCQ9 220 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 MSGN1A6NI15 193 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 TRIM77I1YAP6 450 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMEM50AO95807 157 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 CXCL2P19875 107 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 NKX2-5P52952 324 aaPredicted RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 GNB1P62873 340 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 CX3CL1P78423 397 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 OPCMLQ14982 345 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 C2orf83Q53S99 150 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 TMEM14EPQ6UXP3 125 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 C5orf56Q8N8D9 126 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 SLC24A4Q8NFF2 622 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 OR10P1Q8NGE3 313 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 SGMS2Q8NHU3 365 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 ARPC1AQ92747 370 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 ARPC5LQ9BPX5 153 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 TPSG1Q9NRR2 321 aa6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 SOX21Q9Y651 276 aaPredicted RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 TET2Q6N021 2002 aaPredicted RBP6.54□□□□□ -1.36
SMARCAL1-206ENST00000427645 CORTO00230 105 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 DFFBO76075 338 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 JTBO76095 146 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 IGHV4-59P01825 116 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 OR8U8P0C7N1 319 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 OR13C7P0DN81 318 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 NPY1RP25929 384 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 EWSR1Q01844 656 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 NHLH2Q02577 135 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 ZNF266Q14584 549 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 LY6EQ16553 131 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 AKIRIN2Q53H80 203 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 SPINK9Q5DT21 86 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 STPG2Q8N412 459 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 OR1S2Q8NGQ3 325 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 ZNF48Q96MX3 618 aaPredicted RBP6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 GGACTQ9BVM4 153 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 GON7Q9BXV9 100 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 VPREB3Q9UKI3 123 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 PKD1L1Q8TDX9 2849 aa6.53□□□□□ -1.36
SMARCAL1-206ENST00000427645 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 BORCS7-ASMTA0A0B4J1R7 106 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 MDFIC2A0A1B0GVS7 189 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 IGSF23A1L1A6 192 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 NPIPB5A8MRT5 1133 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 E7EUB6 86 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 H3BP45 60 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 BCL2L11O43521 198 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 CST7O76096 145 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 IGHG2P01859 326 aa6.52□□□□□ -1.37
SMARCAL1-206ENST00000427645 AMY1AP04745 511 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms