RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PRORYQ9H606 182 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 XKR8Q9H6D3 395 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 UCK1Q9HA47 277 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 C12orf4Q9NQ89 552 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 IMP3Q9NV31 184 aaKnown RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM38BQ9NVV0 291 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 BABAM2Q9NXR7 383 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MAT2BQ9NZL9 334 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 EMC3Q9P0I2 261 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CLEC2DQ9UHP7 191 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF229Q9UJW7 825 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF443Q9Y2A4 671 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-208ENST00000427110 SLC35A3Q9Y2D2 325 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 MED31Q9Y3C7 131 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TRAPPC1Q9Y5R8 145 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 R4GN34 69 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 ASXL3Q9C0F0 2248 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 CDH23Q9H251 3354 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 DOCK10Q96BY6 2186 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CEP290O15078 2479 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 A0A087WUJ7 227 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SPTY2D1-AS1A0A0U1RR47 76 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1B0GWA3 101 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1W2PQD3 144 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RAB19A4D1S5 217 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 FABP12A6NFH5 140 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RBFOX3A6NFN3 312 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RIIAD1A6NNX1 92 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 LEUTXA8MZ59 168 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 IGLL5B9A064 214 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 H0YGG7 62 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SLC31A1O15431 190 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 LYRM1O43325 122 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SULT1B1O43704 296 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 GSTZ1O43708 216 aaPredicted RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ARL6IP5O75915 188 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SNAPC5O75971 98 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 UBL3O95164 117 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 NDUFB2O95178 105 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 DHFRP00374 187 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 IFNGP01579 166 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 C1QBP02746 253 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CLPSP04118 112 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 UCHL1P09936 223 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ASAH2BP0C7U1 165 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 P0C880 135 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SCGB1C2P0DMR2 95 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 IFI30P13284 250 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 HRES1P13985 223 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 IL9P15248 144 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF3P17036 446 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CCNOP22674 350 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ERP29P30040 261 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 GABRA3P34903 492 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CD79BP40259 229 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ACTR1BP42025 376 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RRAS2P62070 204 aaPredicted RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RPS25P62851 125 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 MRPS10P82664 201 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 GPR176Q14439 515 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CDK5R1Q15078 307 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CDK10Q15131 360 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ZNHIT3Q15649 155 aaPredicted RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SLC36A2Q495M3 483 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 PDZD11Q5EBL8 140 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 LINC01590Q5TEZ4 76 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 AMMECR1LQ6DCA0 310 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RPL22L1Q6P5R6 122 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 C5orf46Q6UWT4 87 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 DGAT2L6Q6ZPD8 337 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OLIG3Q7RTU3 272 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OOSP2Q86WS3 158 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 LRRC28Q86X40 367 aaPredicted RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 PLCZ1Q86YW0 608 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 AMN1Q8IY45 258 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 Q8N402 240 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ATP6V1C2Q8NEY4 427 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR8G5Q8NG78 346 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR7G1Q8NGA0 311 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR8A1Q8NGG7 326 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR52L1Q8NGH7 329 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR2K2Q8NGT1 345 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR2T27Q8NH04 317 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 OR4C6Q8NH72 309 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CCL4L1Q8NHW4 92 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 LRRC20Q8TCA0 184 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SCGB1C1Q8TD33 95 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SLC37A2Q8TED4 501 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 KLK6Q92876 244 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SMIM19Q96E16 107 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 DIRAS2Q96HU8 199 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 PGLYRP3Q96LB9 341 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 HYLS1Q96M11 299 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 IGF2BP2-AS1Q96M15 143 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ABCG5Q9H222 651 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 SYT4Q9H2B2 425 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 PLEKHA1Q9HB21 404 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 CACYBPQ9HB71 228 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 UBQLN4Q9NRR5 601 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 STMN3Q9NZ72 180 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms