RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 H3BUX3 64 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 APELAP0DMC3 54 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 RNASE2P10153 161 aaKnown RBP12.01□□□□□ -0.49
GINS3-203ENST00000426538 CX3CL1P78423 397 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 BSXQ3C1V8 233 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
GINS3-203ENST00000426538 TMEM170AQ8WVE7 144 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 TMED6Q8WW62 240 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 GINS3Q9BRX5 216 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 GGACTQ9BVM4 153 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 UQCC1Q9NVA1 299 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 ZANQ9Y493 2812 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 IGLC7A0M8Q6 106 aa12□□□□□ -0.49
GINS3-203ENST00000426538 FSHBP01225 129 aa12□□□□□ -0.49
GINS3-203ENST00000426538 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
GINS3-203ENST00000426538 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
GINS3-203ENST00000426538 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
GINS3-203ENST00000426538 ZNF469Q96JG9 3925 aaPredicted RBP12□□□□□ -0.49
GINS3-203ENST00000426538 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
GINS3-203ENST00000426538 TEX22C9J3V5 150 aa12□□□□□ -0.49
GINS3-203ENST00000426538 FGF16O43320 207 aa12□□□□□ -0.49
GINS3-203ENST00000426538 HLA-DRB1P01911 266 aa12□□□□□ -0.49
GINS3-203ENST00000426538 REG1AP05451 166 aa12□□□□□ -0.49
GINS3-203ENST00000426538 SEC11BP0C7V7 166 aa12□□□□□ -0.49
GINS3-203ENST00000426538 LY6EQ16553 131 aa12□□□□□ -0.49
GINS3-203ENST00000426538 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
GINS3-203ENST00000426538 ARPC1AQ92747 370 aa12□□□□□ -0.49
GINS3-203ENST00000426538 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
GINS3-203ENST00000426538 P2RX4Q99571 388 aa12□□□□□ -0.49
GINS3-203ENST00000426538 SLC25A32Q9H2D1 315 aa12□□□□□ -0.49
GINS3-203ENST00000426538 UBE2L5PA0A1B0GUS4 154 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 CD5LO43866 347 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 AREGP15514 252 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 FAM103A1Q9BTL3 118 aaKnown RBP11.99□□□□□ -0.49
GINS3-203ENST00000426538 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
GINS3-203ENST00000426538 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 PRSS46E5RG02 174 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 SPP1P10451 314 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 DEFA4P12838 97 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 DLK1P80370 383 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 FAM74A1Q5RGS3 127 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 C5orf56Q8N8D9 126 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
GINS3-203ENST00000426538 RNF141Q8WVD5 230 aa11.98□□□□□ -0.49
GINS3-203ENST00000426538 PARD6GQ9BYG4 376 aaPredicted RBP11.98□□□□□ -0.49
GINS3-203ENST00000426538 WDR61Q9GZS3 305 aaKnown RBP11.98□□□□□ -0.49
GINS3-203ENST00000426538 ZFHX3Q15911 3703 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 IGHV7-81A0A0B4J1V7 117 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 A6NDX4 124 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 M0QZK8 103 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 VWC2Q2TAL6 325 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 C16orf82Q7Z2V1 217 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 OR1P1Q8NH06 330 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 LRRC20Q8TCA0 184 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 TAF15Q92804 592 aaKnown RBP eCLIP11.97□□□□□ -0.49
GINS3-203ENST00000426538 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 CORTO00230 105 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
GINS3-203ENST00000426538 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
GINS3-203ENST00000426538 RUNX1Q01196 453 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 CLLU1Q5K131 121 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 CACNG8Q8WXS5 425 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 WNT10AQ9GZT5 417 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
GINS3-203ENST00000426538 F11RQ9Y624 299 aaKnown RBP11.97□□□□□ -0.49
GINS3-203ENST00000426538 FNDC10F2Z333 226 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 FGF7P21781 194 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 OPRK1P41145 380 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 IER3P46695 156 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 CD69Q07108 199 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 OR1L6Q8NGR2 347 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 OR5R1Q8NH85 324 aa11.96□□□□□ -0.49
GINS3-203ENST00000426538 PCNPQ8WW12 178 aaKnown RBP11.96□□□□□ -0.49
GINS3-203ENST00000426538 FLNAP21333 2647 aaKnown RBP11.96□□□□□ -0.5
GINS3-203ENST00000426538 CYB5BO43169 146 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 MPDU1O75352 247 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 IGHV4-59P01825 116 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 CTRB1P17538 263 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 NDPQ00604 133 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 ARSJQ5FYB0 599 aaPredicted RBP11.95□□□□□ -0.5
GINS3-203ENST00000426538 C9orf152Q5JTZ5 239 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 CTRB2Q6GPI1 263 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 ETFRF1Q6IPR1 90 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
GINS3-203ENST00000426538 Q6YL49 198 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms