RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CSN3P07498 182 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF137PP52743 207 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 NXPH1P58417 271 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 DMXL2Q8TDJ6 3036 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 C7orf71A4D174 169 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 KLK10O43240 276 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 RFPL3SP0C7P2 107 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 MRPS17Q9Y2R5 130 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 CEP192Q8TEP8 1941 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A26D6RGX4 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 K7ESF4 209 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 TBR1Q16650 682 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 GTSF1LQ9H1H1 148 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 PSG11Q9UQ72 335 aa9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
SEC61A1-202ENST00000424880 LILRA5A6NI73 299 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 LMO7DNF2Z398 122 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 PSPNO60542 156 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 FCGR3BO75015 233 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 GRPP07492 148 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 MLANAQ16655 118 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 TIGITQ495A1 244 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 SLC25A45Q8N413 288 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 SPEM1Q8N4L4 309 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 LOC102723996A0A087X1L8 192 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 H3BUT2 72 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 CD5LO43866 347 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 SCRG1O75711 98 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 LINC00869P0C866 280 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 IGFBP2P18065 325 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 COX19Q49B96 90 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 RNFT1Q5M7Z0 435 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 C1orf159Q96HA4 380 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
SEC61A1-202ENST00000424880 WNT9BO14905 357 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 PPIAL4GP0DN37 164 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 UFSP1Q6NVU6 142 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 WDR73Q6P4I2 378 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 FADS6Q8N9I5 356 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 TMEM186Q96B77 213 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 IGHV3-48P01763 117 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF826PQ6ZT77 177 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 PLXDC1Q8IUK5 500 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 GJE1A6NN92 205 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 HLA-DQA1P01909 254 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 SAMD13Q5VXD3 122 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 Q6ZR03 302 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 BHLHA15Q7RTS1 189 aaPredicted RBP9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 OR10D3Q8NH80 312 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 RAB1CQ92928 201 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 C1QTNF5Q9BXJ0 243 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 PLEKHA3Q9HB20 300 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 TANC2Q9HCD6 1990 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 LAMA5O15230 3695 aa9.31□□□□□ -0.92
SEC61A1-202ENST00000424880 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 VWC2LB2RUY7 222 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 C12orf77C9JDV5 145 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 LIFP15018 202 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 FABP6P51161 128 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 ALKBH6Q3KRA9 238 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 PRAMEF5Q5TYX0 476 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 PRAMEF6Q5VXH4 476 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 C12orf54Q6X4T0 127 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 FAM214BQ7L5A3 538 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 C5orf17Q8NAS9 161 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 SCCPDHQ8NBX0 429 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 SPSB4Q96A44 273 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 JMJD8Q96S16 334 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 LY96Q9Y6Y9 160 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms