RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 CGB2Q6NT52 195 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM14EPQ6UXP3 125 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TIFABQ6ZNK6 161 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 SLC25A42Q86VD7 318 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 H1FOOQ8IZA3 346 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 OR2T10Q8NGZ9 312 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 SFT2D1Q8WV19 159 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 GTSF1Q8WW33 167 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 H1FXQ92522 213 aaKnown RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BHQ93079 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 MGLLQ99685 303 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BNQ99877 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BMQ99879 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 CHCHD7Q9BUK0 85 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 OTORQ9NRC9 128 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 SOX21Q9Y651 276 aaPredicted RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TCOF1Q13428 1488 aaKnown RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 BCL9LQ86UU0 1499 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 DOCK3Q8IZD9 2030 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 CARMIL3Q8ND23 1372 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 TTC37Q6PGP7 1564 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 PRG4Q92954 1404 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV5-51A0A0C4DH38 117 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV5-10-1A0A0J9YXX1 117 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 EPM2AB3EWF7 344 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF73O43830 326 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 PRM2P04554 102 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 HSPB1P04792 205 aaKnown RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 AKAIN1P0CW23 69 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 EIF2B2P49770 351 aaKnown RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF80P51504 273 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 BCL2L15Q5TBC7 163 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF880Q6PDB4 577 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 GLIPR1L1Q6UWM5 242 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 LINC00305Q7Z4B0 112 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 RNF175Q8N4F7 328 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF525Q8N782 197 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 APCDD1LQ8NCL9 501 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 OR10G2Q8NGC3 310 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 OR4A5Q8NH83 315 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 PP6455Q8WZ26 134 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 PEBP4Q96S96 227 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 HDHD3Q9BSH5 251 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM191AQ9H0A3 160 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 RPP21Q9H633 154 aaKnown RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF286AQ9HBT8 521 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 CSAG2Q9Y5P2 127 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 XIRP1Q702N8 1843 aaKnown RBP2.62□□□□□ -1.99
SF3B1-205ENST00000424674 CAMSAP2Q08AD1 1489 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 CECR2Q9BXF3 1484 aa2.62□□□□□ -1.99
SF3B1-205ENST00000424674 MYO5BQ9ULV0 1848 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 SPATA31E1Q6ZUB1 1445 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 ADAMTS13Q76LX8 1427 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 IGLV11-55A0A075B6I3 123 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV3-49A0A0A0MS15 119 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 IGKV1-6A0A0C4DH72 117 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 LOC107984640A0A0U1RRK4 108 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 BBIP1A8MTZ0 92 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 SRRM5B3KS81 715 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 I3L521 148 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 BPY2O14599 106 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 IGKV1-39P01597 117 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 AMBPP02760 352 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 MT-ND4LP03901 98 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 IGKV1D-39P04432 117 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CFC1BP0CG36 223 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CFC1P0CG37 223 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF728P0DKX0 622 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H1DP16402 221 aaKnown RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CRYGSP22914 178 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 RPL22P35268 128 aaKnown RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 INSL3P51460 131 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 AQP4P55087 323 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 YPEL3P61236 119 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 RPL30P62888 115 aaKnown RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 EIF5AP63241 154 aaKnown RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CDK6Q00534 326 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 RNASE13Q5GAN3 156 aaKnown RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 FAM78AQ5JUQ0 283 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF440Q8IYI8 595 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 Q8N377 158 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 C14orf178Q8N769 122 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 C20orf203Q8NBC4 194 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 OR5C1Q8NGR4 320 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 OR4K13Q8NH42 304 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 FNDC9Q8TBE3 224 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF799Q96GE5 643 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF414Q96IQ9 312 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 YPEL2Q96QA6 119 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 OR4C12Q96R67 309 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 TBL1YQ9BQ87 522 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 PYGO2Q9BRQ0 406 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 C8orf17Q9NRJ1 99 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CBLN4Q9NTU7 201 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 CCDC167Q9P0B6 97 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 BOKQ9UMX3 212 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-205ENST00000424674 KLK5Q9Y337 293 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms