RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 UBE2E2Q96LR5 201 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 TRRAPQ9Y4A5 3859 aa13.22□□□□□ -0.29
FOXN4-203ENST00000423960 M0QZ24 198 aa13.22□□□□□ -0.29
FOXN4-203ENST00000423960 C2orf68Q2NKX9 166 aa13.22□□□□□ -0.29
FOXN4-203ENST00000423960 PDLIM3Q53GG5 364 aaPredicted RBP13.22□□□□□ -0.29
FOXN4-203ENST00000423960 C19orf35Q6ZS72 473 aa13.22□□□□□ -0.29
FOXN4-203ENST00000423960 ENY2Q9NPA8 101 aa13.22□□□□□ -0.29
FOXN4-203ENST00000423960 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 SNRPGP15A8MWD9 76 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 NUDT19A8MXV4 375 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 INS-IGF2F8WCM5 200 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 CYB5BO43169 146 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 PITX3O75364 302 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 HIST1H1BP16401 226 aaKnown RBP13.21□□□□□ -0.29
FOXN4-203ENST00000423960 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
FOXN4-203ENST00000423960 RGS21Q2M5E4 152 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 TREML4Q6UXN2 200 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 FANCD2OSQ96PS1 177 aa13.21□□□□□ -0.29
FOXN4-203ENST00000423960 C13orf42A0A1B0GVH6 325 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 NXPH3O95157 252 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 RHOGP84095 191 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 TNFRSF9Q07011 255 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 KLK9Q2XQG4 91 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 HSPB7Q9UBY9 170 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 KLK9Q9UKQ9 250 aa13.2□□□□□ -0.3
FOXN4-203ENST00000423960 F11RQ9Y624 299 aaKnown RBP13.2□□□□□ -0.3
FOXN4-203ENST00000423960 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 OR2J3O76001 311 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 SNCAP37840 140 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 ATP5G2Q06055 141 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 SLC25A24Q6NUK1 477 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 OR1L6Q8NGR2 347 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 C4orf3Q8WVX3 66 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 P2RX4Q99571 388 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 FBXL7Q9UJT9 491 aa13.19□□□□□ -0.3
FOXN4-203ENST00000423960 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 FAM90A26D6RGX4 464 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 NDUFB8O95169 186 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 IGHV3-11P01762 117 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 DEFA5Q01523 94 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 C8orf86Q6ZUL3 223 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 OR1P1Q8NH06 330 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 RBKSQ9H477 322 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
FOXN4-203ENST00000423960 THYN1Q9P016 225 aa13.18□□□□□ -0.3
FOXN4-203ENST00000423960 TET2Q6N021 2002 aaPredicted RBP13.18□□□□□ -0.3
FOXN4-203ENST00000423960 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 I3L521 148 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 CCSO14618 274 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 MED6O75586 246 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
FOXN4-203ENST00000423960 RUNX1Q01196 453 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
FOXN4-203ENST00000423960 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 ZNF114Q8NC26 417 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
FOXN4-203ENST00000423960 C5orf51A6NDU8 294 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 TSPAN15O95858 294 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
FOXN4-203ENST00000423960 MFAP2P55001 183 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 TATDN3Q17R31 274 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
FOXN4-203ENST00000423960 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 GSKIPQ9P0R6 139 aa13.16□□□□□ -0.3
FOXN4-203ENST00000423960 CCL24O00175 119 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 RNASE2P10153 161 aaKnown RBP13.15□□□□□ -0.3
FOXN4-203ENST00000423960 MYCNOSP40205 109 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 HTR2BP41595 481 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 NKX2-1P43699 371 aaPredicted RBP13.15□□□□□ -0.3
FOXN4-203ENST00000423960 ID3Q02535 119 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 OXA1LQ15070 435 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 GSG1LQ6UXU4 331 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 RAX2Q96IS3 184 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 CXorf58Q96LI9 332 aa13.15□□□□□ -0.3
FOXN4-203ENST00000423960 C7orf66A4D0T2 115 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 SYNGR2O43760 224 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 SSNA1O43805 119 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 PF4P02776 101 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
FOXN4-203ENST00000423960 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 BSXQ3C1V8 233 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms