RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
HDAC6-205ENST00000423941 IGHV4OR15-8A0A075B7B6 117 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 A0A087WW49 117 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 LINC01619G3V211 115 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 WIPF1O43516 503 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 OR2J3O76001 311 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 NDUFB8O95169 186 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 DUS4LO95620 317 aaKnown RBP14.21□□□□□ -0.13
HDAC6-205ENST00000423941 TCRBP04435 133 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 OR8U8P0C7N1 319 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 DEFA5Q01523 94 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 ATP5G2Q06055 141 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 KPRPQ5T749 579 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-205ENST00000423941 ZNF114Q8NC26 417 aa14.21□□□□□ -0.13
HDAC6-205ENST00000423941 RANGRFQ9HD47 186 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-205ENST00000423941 NOTCH3Q9UM47 2321 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.2□□□□□ -0.14
HDAC6-205ENST00000423941 C9orf170A2RU37 121 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 MECP2P51608 486 aaKnown RBP14.2□□□□□ -0.14
HDAC6-205ENST00000423941 C15orf32Q32M92 178 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 FAM209BQ5JX69 171 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 PVRIGQ6DKI7 326 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 HINT2Q9BX68 163 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 PEF1Q9UBV8 284 aaKnown RBP14.2□□□□□ -0.14
HDAC6-205ENST00000423941 CACNG5Q9UF02 275 aa14.2□□□□□ -0.14
HDAC6-205ENST00000423941 G3V4G9 280 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 OR4E1P0C645 316 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 DEFA4P12838 97 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 IGLL1P15814 213 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 VAMP1P23763 118 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 SPCS3P61009 180 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 OXLD1Q5BKU9 147 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 OR1L6Q8NGR2 347 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 OR1P1Q8NH06 330 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 DPF1Q92782 380 aa14.19□□□□□ -0.14
HDAC6-205ENST00000423941 DLX4Q92988 240 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-205ENST00000423941 A0A1B0GU03 582 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 PITX3O75364 302 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 TRBV12-3P01733 135 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 SULT1A3P0DMM9 295 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 SULT1A4P0DMN0 295 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 SLC25A6P12236 298 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 DHRS2Q13268 280 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 EXOSC2Q13868 293 aaKnown RBP14.18□□□□□ -0.14
HDAC6-205ENST00000423941 KLF5Q13887 457 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-205ENST00000423941 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 BSXQ3C1V8 233 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 LYG2Q86SG7 212 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 RNASE11Q8TAA1 199 aaKnown RBP14.18□□□□□ -0.14
HDAC6-205ENST00000423941 VN1R17PQ8TDU5 208 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 DCUN1D4Q92564 292 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 CCDC140Q96MF4 163 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 MCRIP2Q9BUT9 160 aaKnown RBP14.18□□□□□ -0.14
HDAC6-205ENST00000423941 C20orf85Q9H1P6 137 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 THYN1Q9P016 225 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 CACFD1Q9UGQ2 172 aa14.18□□□□□ -0.14
HDAC6-205ENST00000423941 NOTCH1P46531 2555 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 IFNA17P01571 189 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 ANXA7P20073 488 aaKnown RBP14.17□□□□□ -0.14
HDAC6-205ENST00000423941 ZP3P21754 424 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 SLURP1P55000 103 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 ERHP84090 104 aaKnown RBP14.17□□□□□ -0.14
HDAC6-205ENST00000423941 SMCO1Q147U7 214 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 CXorf58Q96LI9 332 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 ATP6V0BQ99437 205 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 PLEKHA3Q9HB20 300 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 TMED3Q9Y3Q3 217 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 MEGF8Q7Z7M0 2845 aa14.17□□□□□ -0.14
HDAC6-205ENST00000423941 TRBV7-1A0A0A6YYK4 115 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 ANKRD34BA5PLL1 514 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 MFSD2BA6NFX1 497 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 BMPR1BO00238 502 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 CYB5BO43169 146 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 HOXD3P31249 432 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-205ENST00000423941 SLC25A24Q6NUK1 477 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 MZT2BQ6NZ67 158 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 DUSP18Q8NEJ0 188 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 ZNF502Q8TBZ5 544 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 HSPB7Q9UBY9 170 aa14.16□□□□□ -0.14
HDAC6-205ENST00000423941 K7EIM0 57 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 OVOL1O14753 267 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 HLA-AP01891 365 aaKnown RBP14.15□□□□□ -0.14
HDAC6-205ENST00000423941 RAB25P57735 213 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 EGFEM1PQ0D2K5 195 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 SPINK9Q5DT21 86 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 PDCD10Q9BUL8 212 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 NUDT15Q9NV35 164 aa14.15□□□□□ -0.14
HDAC6-205ENST00000423941 FAM240BA0A1B0GVZ2 78 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 I3L2K1 104 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 RNASE2P10153 161 aaKnown RBP14.14□□□□□ -0.15
HDAC6-205ENST00000423941 TNFRSF9Q07011 255 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 EEF1AKMT3Q96AZ1 226 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 GPR61Q9BZJ8 451 aa14.14□□□□□ -0.15
HDAC6-205ENST00000423941 F8W735 103 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-205ENST00000423941 FCGR2BP31994 310 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-205ENST00000423941 ACSM6Q6P461 480 aa14.13□□□□□ -0.15
HDAC6-205ENST00000423941 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
HDAC6-205ENST00000423941 SCARB1Q8WTV0 552 aa14.13□□□□□ -0.15
HDAC6-205ENST00000423941 TRAV6A0A075B6T7 132 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms