RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 TATDN3Q17R31 274 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 MRGPRG-AS1Q2M3A8 158 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 SLC22A6Q4U2R8 563 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 HSP90B2PQ58FF3 399 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 MEDAGQ5VYS4 303 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 ZNF880Q6PDB4 577 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 SPATA24Q86W54 205 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 CDH26Q8IXH8 852 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 TSNAXQ99598 290 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 THTPAQ9BU02 230 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 FAM192AQ9GZU8 254 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 NRN1Q9NPD7 142 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 SLC2A8Q9NY64 477 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 THYN1Q9P016 225 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 METTL1Q9UBP6 276 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 CACNG5Q9UF02 275 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 POMPQ9Y244 141 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 KLK5Q9Y337 293 aaPredicted RBP3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 WASHC3Q9Y3C0 194 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 PEX16Q9Y5Y5 336 aa3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
CDC42EP3-202ENST00000422687 DNAH5Q8TE73 4624 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 A0A0J9YWU9 116 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 A0A1B0GVY2 172 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 C2orf70A6NJV1 201 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 K7EQG2 157 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LGALS9O00182 355 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PDCD6O75340 191 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 NAPSAO96009 420 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 IGKV1-16P04430 117 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 CD2P06729 351 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 CFC1BP0CG36 223 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 CFC1P0CG37 223 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LIMS3P0CW19 117 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LIMS4P0CW20 117 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 ID1P41134 155 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 GBX2P52951 348 aaPredicted RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PPP3R1P63098 170 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PJVKQ0ZLH3 352 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PLGLAQ15195 96 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LINC01620Q4KN68 170 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 CCDC58Q4VC31 144 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 RPL39P5Q59GN2 51 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 XAF1Q6GPH4 301 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 RPL22L1Q6P5R6 122 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LYG2Q86SG7 212 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 LHFPL3Q86UP9 236 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PDPNQ86YL7 162 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 GRPEL2Q8TAA5 225 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 TSEN15Q8WW01 171 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PTX4Q96A99 478 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 GALMQ96C23 342 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 ZNF184Q99676 751 aaPredicted RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 GGTLC1Q9BX51 225 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 PARP12Q9H0J9 701 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 RDH8Q9NYR8 311 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 KCNIP1Q9NZI2 227 aa3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 ZNF230Q9UIE0 474 aaPredicted RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 MRPS7Q9Y2R9 242 aaKnown RBP3.38□□□□□ -1.87
CDC42EP3-202ENST00000422687 TRAV8-7A0A075B6U6 113 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 LOC102724200A0A096LPH7 203 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 FAM223BA6NKX1 122 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 SNTNA6NMZ2 147 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 FOLR2P14207 255 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 MGMTP16455 207 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 FASP25445 335 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 BMI1P35226 326 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 LGALS7P47929 136 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 GTF2A1P52655 376 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 RPS11P62280 158 aaKnown RBP eCLIP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 DEFA5Q01523 94 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 ZNF45Q02386 682 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 RIPK1Q13546 671 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 KLK9Q2XQG4 91 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 DNAL1Q4LDG9 190 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 GLIPR1L1Q6UWM5 242 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 NR2C2APQ86WQ0 139 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 GPHB5Q86YW7 130 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 FAM223AQ8IWN6 122 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 TMEM61Q8N0U2 210 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 OR52I1Q8NGK6 324 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 RHOXF1Q8NHV9 184 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 PCNPQ8WW12 178 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 SMIM19Q96E16 107 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 CENPNQ96H22 339 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 ABHD14BQ96IU4 210 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 CLCC1Q96S66 551 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 S100A13Q99584 98 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 FGF20Q9NP95 211 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-202ENST00000422687 ZNF355PQ9NSJ1 428 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms