RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
CDH1-202ENST00000422392 SLC35B1P78383 322 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 TNFAIP6P98066 277 aaPredicted RBP12.9□□□□□ -0.34
CDH1-202ENST00000422392 FAM27E3Q08E93 113 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 STUMQ69YW2 141 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 C1orf174Q8IYL3 243 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 MRPL18Q9H0U6 180 aaKnown RBP12.9□□□□□ -0.34
CDH1-202ENST00000422392 CBLN4Q9NTU7 201 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 IL36BQ9NZH7 164 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 ZNF292O60281 2723 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 FXYD3Q14802 87 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 CMTM2Q8TAZ6 248 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
CDH1-202ENST00000422392 IGLV3-9A0A075B6K5 115 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 OR7C2O60412 319 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 TAS2R60P59551 318 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 RAB4BP61018 213 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 OR1L6Q8NGR2 347 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 OR9G1Q8NH87 305 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 RNASE7Q9H1E1 156 aaKnown RBP12.89□□□□□ -0.35
CDH1-202ENST00000422392 SLC45A2Q9UMX9 530 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 OR10J1P30954 320 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 SLC35D1Q9NTN3 355 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
CDH1-202ENST00000422392 SPTBN2O15020 2390 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 FCN1O00602 326 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 SERF1AO75920 110 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 MT-CO2P00403 227 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 CCL8P80075 99 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
CDH1-202ENST00000422392 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 LRBAP50851 2863 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 HELTA6NFD8 242 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
CDH1-202ENST00000422392 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 UPK2O00526 184 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
CDH1-202ENST00000422392 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
CDH1-202ENST00000422392 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
CDH1-202ENST00000422392 REG1BP48304 166 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 LGALS4P56470 323 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 TDRG1Q3Y452 100 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 PIP4P1Q86T03 277 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ATG101Q9BSB4 218 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 V9GYV3 84 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 ACACAQ13085 2346 aa12.88□□□□□ -0.35
CDH1-202ENST00000422392 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 CRISP2P16562 243 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 GNG4P50150 75 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 TCL1AP56279 114 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 RPEL1Q2QD12 228 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 MORN5Q5VZ52 161 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 Q6ZWC4 215 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 ABCA1O95477 2261 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 C9JCJ5 164 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 E7EUB6 86 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 GATA4P43694 442 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 ZADH2Q8N4Q0 377 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
CDH1-202ENST00000422392 K7EM74 188 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 AREGP15514 252 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
CDH1-202ENST00000422392 ZNF788Q6ZQV5 615 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
CDH1-202ENST00000422392 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 ADTRPQ96IZ2 230 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 A8MXE2 369 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 CCL3L1P16619 93 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 CHRNB4P30926 498 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 CDKN1AP38936 164 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 SSBP2P81877 361 aaPredicted RBP12.86□□□□□ -0.35
CDH1-202ENST00000422392 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 OR2T6Q8NHC8 308 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
CDH1-202ENST00000422392 POLEQ07864 2286 aa12.86□□□□□ -0.35
CDH1-202ENST00000422392 SELENOTP62341 195 aa12.85□□□□□ -0.35
CDH1-202ENST00000422392 RTL8BQ17RB0 113 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms