RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 Q56UQ5 140 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 OR6F1Q8NGZ6 308 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 OR5B3Q8NH48 314 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 FKBP11Q9NYL4 201 aa12.84□□□□□ -0.35
PTCD1-202ENST00000419981 NUPR2A6NF83 97 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 F8W735 103 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-202ENST00000419981 K7EIM0 57 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 K7EMT4 169 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 UBE2CO00762 179 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 ZNF207O43670 478 aaKnown RBP12.83□□□□□ -0.36
PTCD1-202ENST00000419981 PRSS3P35030 304 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 HRH1P35367 487 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 RPS19P39019 145 aaKnown RBP12.83□□□□□ -0.36
PTCD1-202ENST00000419981 TNFRSF9Q07011 255 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 LINC00476Q8WZB0 136 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 TSC22D3Q99576 134 aa12.83□□□□□ -0.36
PTCD1-202ENST00000419981 KIR2DL5BA0A0G2JN68 375 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 KIR2DL5BA0A0G2JPC4 375 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 C15orf61A6NNL5 157 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-202ENST00000419981 S100GP29377 79 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 ADMP35318 185 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 KIR2DL5AQ8N109 375 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 KIR2DL5BQ8NHK3 375 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 TMEM14BQ9NUH8 114 aa12.82□□□□□ -0.36
PTCD1-202ENST00000419981 DBX1A6NMT0 343 aa12.81□□□□□ -0.36
PTCD1-202ENST00000419981 HLA-DMAP28067 261 aa12.81□□□□□ -0.36
PTCD1-202ENST00000419981 LSM3P62310 102 aaKnown RBP12.81□□□□□ -0.36
PTCD1-202ENST00000419981 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-202ENST00000419981 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
PTCD1-202ENST00000419981 OR1P1Q8NH06 330 aa12.81□□□□□ -0.36
PTCD1-202ENST00000419981 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
PTCD1-202ENST00000419981 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-202ENST00000419981 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
PTCD1-202ENST00000419981 LY6G6CO95867 125 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 CTSGP08311 255 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
PTCD1-202ENST00000419981 TSPAN5P62079 268 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCD1-202ENST00000419981 LYSMD2Q8IV50 215 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 RNF183Q96D59 192 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 YIPF6Q96EC8 236 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
PTCD1-202ENST00000419981 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
PTCD1-202ENST00000419981 TBC1D26Q86UD7 250 aa12.79□□□□□ -0.36
PTCD1-202ENST00000419981 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
PTCD1-202ENST00000419981 GPX8Q8TED1 209 aa12.79□□□□□ -0.36
PTCD1-202ENST00000419981 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
PTCD1-202ENST00000419981 C6orf62Q9GZU0 229 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-202ENST00000419981 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 YIF1AO95070 293 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 EIF4EP06730 217 aaKnown RBP12.78□□□□□ -0.36
PTCD1-202ENST00000419981 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-202ENST00000419981 MFAP4P55083 255 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-202ENST00000419981 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 TMEM116Q8NCL8 245 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 SEC22AQ96IW7 307 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 RNF2Q99496 336 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 TXN2Q99757 166 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 RHPN1-AS1Q9BWJ2 59 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 MAP6D1Q9H9H5 199 aa12.78□□□□□ -0.36
PTCD1-202ENST00000419981 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 I3L2K1 104 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 CHEK1O14757 476 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-202ENST00000419981 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 OR10C1Q96KK4 312 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
PTCD1-202ENST00000419981 KLK5Q9Y337 293 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-202ENST00000419981 AGRNO00468 2067 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 A0A087WXM4 84 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 GNG7O60262 68 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 MT-CO2P00403 227 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 RCVRNP35243 200 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 UCP3P55916 312 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-202ENST00000419981 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
PTCD1-202ENST00000419981 CMTM3Q96MX0 182 aa12.76□□□□□ -0.37
PTCD1-202ENST00000419981 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
PTCD1-202ENST00000419981 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
PTCD1-202ENST00000419981 TRAV14DV4A0A0A6YYC5 116 aa12.75□□□□□ -0.37
PTCD1-202ENST00000419981 APOA1P02647 267 aa12.75□□□□□ -0.37
PTCD1-202ENST00000419981 TFPI2P48307 235 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms