RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 ATRQ13535 2644 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 KANTRA0A1W2PQU2 76 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 NPIPB5A8MRT5 1133 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 CLDN34H7C241 214 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 JTBO76095 146 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 NXPH3O95157 252 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 BRI3O95415 125 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 AP2S1P53680 142 aaPredicted RBP11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 RAB11AP62491 216 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 FXYD3Q14802 87 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 VWC2Q2TAL6 325 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 SPANXN5Q5MJ07 72 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 OR1P1Q8NH06 330 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 CYTL1Q9NRR1 136 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 VPREB3Q9UKI3 123 aa11.29□□□□□ -0.6
SHMT1P1-201ENST00000419974 KCNAB3O43448 404 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 DFFBO76075 338 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 IGF1P05019 195 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 EGR2P11161 476 aaPredicted RBP11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 MYOD1P15172 320 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 CTRB1P17538 263 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 NPY1RP25929 384 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 EIF5AP63241 154 aaKnown RBP11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 NHLH2Q02577 135 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 ZNF266Q14584 549 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 CTRB2Q6GPI1 263 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 OR10P1Q8NGE3 313 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
SHMT1P1-201ENST00000419974 CUBNO60494 3623 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 COL6A5A8TX70 2615 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 CORTO00230 105 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 CNIH1O95406 144 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 IFNA10P01566 189 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 IGHG2P01859 326 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 SNCAP37840 140 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 HAPLN4Q86UW8 402 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 OR1S2Q8NGQ3 325 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 PHYHIPLQ96FC7 376 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 SLA2Q9H6Q3 261 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 FBXL17Q9UF56 701 aa11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.61
SHMT1P1-201ENST00000419974 TNCP24821 2201 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 H3BP45 60 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OPN1MWP04001 364 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 FAM157CP0CG43 387 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OR13C7P0DN81 318 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 OR5C1Q8NGR4 320 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 P2RX4Q99571 388 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 ZC4H2Q9NQZ6 224 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
SHMT1P1-201ENST00000419974 FBN1P35555 2871 aaKnown RBP11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 CST7O76096 145 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 DLK1P80370 383 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 NDPQ00604 133 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 TMEM267Q0VDI3 215 aaPredicted RBP11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 TMEM219Q86XT9 240 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 MDFIQ99750 246 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 ATP5SQ99766 215 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
SHMT1P1-201ENST00000419974 BORCS7-ASMTA0A0B4J1R7 106 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 RGS13O14921 159 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 CYB5BO43169 146 aa11.24□□□□□ -0.61
SHMT1P1-201ENST00000419974 AREGP15514 252 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms