RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GNRHRP30968 328 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 APLNRP35414 380 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RBM11P57052 281 aaKnown RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 YPEL3P61236 119 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 PPP1CAP62136 330 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 PPP1CBP62140 327 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SELENOTP62341 195 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RPL23P62829 140 aaKnown RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 CCL7P80098 99 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 HERPUD1Q15011 391 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 MSMO1Q15800 293 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 LRRC75BQ2VPJ9 315 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 PLPPR5Q32ZL2 321 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 MAJINQ3KP22 176 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SP6Q3SY56 376 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SPIN3Q5JUX0 258 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 COL5A1-AS1Q5SY13 56 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 FAM27BQ5VT28 67 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OTPQ5XKR4 325 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RHBDD2Q6NTF9 364 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TOMM20LQ6UXN7 152 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TEX43Q6ZNM6 134 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 MOB1BQ7L9L4 216 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 P4HA3Q7Z4N8 544 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 C17orf82Q86X59 251 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 C20orf196Q8IYI0 205 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TMEM123Q8N131 208 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SLC22A18ASQ8N1D0 253 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF525Q8N782 197 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TCTEX1D1Q8N7M0 179 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF321PQ8N8H1 164 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OR4B1Q8NGF8 309 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OR2D3Q8NGH3 330 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OR5D18Q8NGL1 313 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 MRPL30Q8TCC3 161 aaKnown RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 PATE1Q8WXA2 126 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RAB1CQ92928 201 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 LHX4Q969G2 390 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TMEM54Q969K7 222 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 REEP6Q96HR9 211 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 JSRP1Q96MG2 331 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 CIB3Q96Q77 187 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 MIEN1Q9BRT3 115 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 FAAP24Q9BTP7 215 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 EMC6Q9BV81 110 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SNHG12Q9BXW3 62 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 WDR61Q9GZS3 305 aaKnown RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF442Q9H7R0 627 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 METTL7AQ9H8H3 244 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 Q9HAA7 133 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 KCNIP2Q9NS61 270 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RPRMQ9NS64 109 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SLC39A9Q9NUM3 307 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CLEC5AQ9NY25 188 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 KLRF1Q9NZS2 232 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 NAGKQ9UJ70 344 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ST3GAL6Q9Y274 331 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RNF115Q9Y4L5 304 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 WDFY4Q6ZS81 3184 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 DOCK8Q8NF50 2099 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 KIAA1549Q9HCM3 1950 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 DMDP11532 3685 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 IGHV5-51A0A0C4DH38 117 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 MDFIC2A0A1B0GVS7 189 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 C20orf202A1L168 122 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 SLC22A20A6NK97 555 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CD300LBA8K4G0 201 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 FAM166BA8MTA8 275 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF705FA8MVS1 300 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 ITGB1BP1O14713 200 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TNFSF11O14788 317 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 SH2D1BO14796 132 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 DUX1O43812 170 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 MPDU1O75352 247 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PGLYRP1O75594 196 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 CBR3O75828 277 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR2J2O76002 312 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CST7O76096 145 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR7C1O76099 320 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 NAPSAO96009 420 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 MT-CO2P00403 227 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 HPRT1P00492 218 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 GYPAP02724 150 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 REG1AP05451 166 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 IGHV4-34P06331 123 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 SNRPCP09234 159 aaKnown RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF705DP0CH99 300 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF705BP0CI00 300 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 TUBG1P23258 451 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CD82P27701 267 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OPRM1P35372 400 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 FGF12P61328 243 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 RUNX1Q01196 453 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF92Q03936 586 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 SLC38A11Q08AI6 406 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF154Q13106 437 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 KLF5Q13887 457 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 COTL1Q14019 142 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 NKAIN1Q4KMZ8 207 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms