RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MGST2Q99735 147 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 GGTLC1Q9BX51 225 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 MAP1LC3BQ9GZQ8 125 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 TPSG1Q9NRR2 321 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 HILPDAQ9Y5L2 63 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 MYO18BQ8IUG5 2567 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 SEC14L6B5MCN3 397 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 E7EUB6 86 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 TSPAN9O75954 239 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 SNAPINO95295 136 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 HSPB1P04792 205 aaKnown RBP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 TAGLN2P37802 199 aaKnown RBP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 RPL29P47914 159 aaKnown RBP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 CD69Q07108 199 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 LHFPL4Q7Z7J7 247 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 MALSU1Q96EH3 234 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 A0A1B0GV50 99 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 C9JQL5 133 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 NDUFA3O95167 84 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 IFNA1P01562 189 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 IGKV1D-33P01593 117 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 IGKV1-33P01594 117 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 OR13C7P0DN81 318 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 PPT1P50897 306 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 TNXAQ16473 311 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 TMEM249Q2WGJ8 235 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 LCN15Q6UWW0 184 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 FLNCQ14315 2725 aa13.46□□□□□ -0.26
SSBP3-205ENST00000417664 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 EPG5Q9HCE0 2579 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 NBR2O15453 112 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 CNTFRP26992 372 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 EBI3Q14213 229 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 MMDQ15546 238 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 C10orf55Q5SWW7 151 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 PVRIGQ6DKI7 326 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 TBX15Q96SF7 602 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 P2RX4Q99571 388 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 NKX6-2Q9C056 277 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-205ENST00000417664 PXMP4Q9Y6I8 212 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 COL12A1Q99715 3063 aa13.45□□□□□ -0.26
SSBP3-205ENST00000417664 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 CORTO00230 105 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
SSBP3-205ENST00000417664 SCO1O75880 301 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 HNF4GQ14541 408 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 PLGLAQ15195 96 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 SSX2Q16385 188 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 ETFRF1Q6IPR1 90 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
SSBP3-205ENST00000417664 C1orf159Q96HA4 380 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 FBXL15Q9H469 300 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 BCL2P10415 239 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 CDC34P49427 236 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-205ENST00000417664 B2MP61769 119 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 PAX8Q06710 450 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 GAMTQ14353 236 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-205ENST00000417664 RARRES2Q99969 163 aa13.44□□□□□ -0.26
SSBP3-205ENST00000417664 IGHV4-61A0A0C4DH41 118 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 A0A1W2PPV4 95 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 HAGHQ16775 308 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 FAM122CQ6P4D5 195 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 SSX7Q7RTT5 188 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 OR1P1Q8NH06 330 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 SLC25A22Q9H936 323 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 GNG13Q9P2W3 67 aa13.43□□□□□ -0.26
SSBP3-205ENST00000417664 YIF1AO95070 293 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 PRR20EP86478 221 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 PRR20CP86479 221 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 PRR20DP86480 221 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 PRR20BP86481 221 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 PRR20AP86496 221 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 ICAM4Q14773 271 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 MIC13Q5XKP0 118 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 SRSF12Q8WXF0 261 aaKnown RBP13.42□□□□□ -0.26
SSBP3-205ENST00000417664 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 VAX2Q9UIW0 290 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 SLC45A2Q9UMX9 530 aa13.42□□□□□ -0.26
SSBP3-205ENST00000417664 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-205ENST00000417664 BRS3P32247 399 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 HES1Q14469 280 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 SOHLH1Q5JUK2 328 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 Q8N6K4 173 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 STPG3Q8N7X2 389 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
SSBP3-205ENST00000417664 A0A1W2PRD5 423 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 A0A1W2PRF3 423 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 A0A1W2PRM7 423 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 TEX22C9J3V5 150 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 SRP19P09132 144 aaKnown RBP13.4□□□□□ -0.26
SSBP3-205ENST00000417664 FAM106CPP0CH98 169 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms