RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IGLV3-9A0A075B6K5 115 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 IER3P46695 156 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 RELNP78509 3460 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 TEX50A0A1B0GTY4 177 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 E7EUB6 86 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 OR7C2O60412 319 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 OR10J1P30954 320 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 CCKARP32238 428 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 LINC00310P59036 64 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 FXYD3Q14802 87 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 SLC35D1Q9NTN3 355 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
HDAC9-208ENST00000417496 SAA1P0DJI8 122 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-208ENST00000417496 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 MORN5Q5VZ52 161 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 FAM222BQ8WU58 562 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 MRPL18Q9H0U6 180 aaKnown RBP11.81□□□□□ -0.52
HDAC9-208ENST00000417496 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 UPK2O00526 184 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 FCN1O00602 326 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 TCL1AP56279 114 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 YPEL3P61236 119 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-208ENST00000417496 MMD2Q8IY49 270 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 NOL4LQ96MY1 436 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-208ENST00000417496 CBLN4Q9NTU7 201 aa11.81□□□□□ -0.52
HDAC9-208ENST00000417496 PLXNB1O43157 2135 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 HELTA6NFD8 242 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 EREGO14944 169 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 CCL3L1P16619 93 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 SUMO1P63165 101 aaKnown RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 OR1L6Q8NGR2 347 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 CMTM2Q8TAZ6 248 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 POLR3KQ9Y2Y1 108 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 NAV3Q8IVL0 2385 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF292O60281 2723 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 GGTLC3B5MD39 225 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 SERF1AO75920 110 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 MT-CO2P00403 227 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 GATA4P43694 442 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 GNG4P50150 75 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 RAB4BP61018 213 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 SSBP2P81877 361 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF788Q6ZQV5 615 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 NHLRC2Q8NBF2 726 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 ST6GALNAC3Q8NDV1 305 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
HDAC9-208ENST00000417496 V9GYV3 84 aa11.8□□□□□ -0.52
HDAC9-208ENST00000417496 RAI1Q7Z5J4 1906 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-208ENST00000417496 ACACAQ13085 2346 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-208ENST00000417496 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-208ENST00000417496 CHRNB4P30926 498 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 KIAA1644Q3SXP7 199 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 Q6ZWC4 215 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 C11orf52Q96A22 123 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
HDAC9-208ENST00000417496 NAGKQ9UJ70 344 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 SNURFLB1AK76 121 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 CRISP2P16562 243 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 LGALS4P56470 323 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 SELENOVP59797 346 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
HDAC9-208ENST00000417496 CSMD1Q96PZ7 3565 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
HDAC9-208ENST00000417496 ABCA1O95477 2261 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 DYSFO75923 2080 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 FCN3O75636 299 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 AREGP15514 252 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 CD40P25942 277 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 TAS2R60P59551 318 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 ADTRPQ96IZ2 230 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 A8MXE2 369 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-208ENST00000417496 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
HDAC9-208ENST00000417496 POU2AF1Q16633 256 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 RPEL1Q2QD12 228 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms