RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 TENM2Q9NT68 2774 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 FAM25AB3EWG3 89 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 FAM25CB3EWG5 89 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 FAM25GB3EWG6 89 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 OR1P1Q8NH06 330 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 OR4A16Q8NH70 328 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 AP3S1Q92572 193 aa13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 GAR1Q9NY12 217 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-208ENST00000416159 DBX1A6NMT0 343 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 K7EIM0 57 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 OR2C3Q8N628 320 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 SPAG8Q99932 426 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
PDLIM2-208ENST00000416159 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 K7EMT4 169 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 M0QYG6 137 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 TSPAN4O14817 238 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 ZNF182P17025 639 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 ADMP35318 185 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 Q56UQ5 140 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 UBAC2Q8NBM4 344 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 C20orf24Q9BUV8 137 aa13.14□□□□□ -0.31
PDLIM2-208ENST00000416159 DYNC2H1Q8NCM8 4307 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 GABARAPO95166 117 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 PGAM2P15259 253 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 RND3P61587 244 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 HSPE1P61604 102 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 CTF1Q16619 201 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 RNASE10Q5GAN6 216 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 C15orf40Q8WUR7 153 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 TXN2Q99757 166 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 KLK11Q9UBX7 282 aa13.13□□□□□ -0.31
PDLIM2-208ENST00000416159 NUPL2O15504 423 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 CTSGP08311 255 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 FCGR2BP31994 310 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 MFAP4P55083 255 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 ERHP84090 104 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 ZNF114Q8NC26 417 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 EXTL2Q9UBQ6 330 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
PDLIM2-208ENST00000416159 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
PDLIM2-208ENST00000416159 I3L2K1 104 aa13.11□□□□□ -0.31
PDLIM2-208ENST00000416159 TBPP20226 339 aa13.11□□□□□ -0.31
PDLIM2-208ENST00000416159 LHFPL1Q86WI0 220 aa13.11□□□□□ -0.31
PDLIM2-208ENST00000416159 OR52I2Q8NH67 350 aa13.11□□□□□ -0.31
PDLIM2-208ENST00000416159 ATG12O94817 140 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 CD3DP04234 171 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 SMIM18P0DKX4 95 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 PIGPP57054 158 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 STARD9Q9P2P6 4700 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 RYR2Q92736 4967 aa13.1□□□□□ -0.31
PDLIM2-208ENST00000416159 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 OR4C46A6NHA9 309 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 MT-CO2P00403 227 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 PI3P19957 117 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 TMEM229BQ8NBD8 167 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 ZFAND1Q8TCF1 268 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 UBQLN2Q9UHD9 624 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 SMPXQ9UHP9 88 aa13.09□□□□□ -0.31
PDLIM2-208ENST00000416159 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 CD74P04233 296 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 CTSDP07339 412 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 APOC4P55056 127 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 TAS2R19P59542 299 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 CCDC71LQ8N9Z2 235 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 TERB2Q8NHR7 220 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 ABHD1Q96SE0 405 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 NXF2Q9GZY0 626 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 COPZ2Q9P299 210 aa13.08□□□□□ -0.32
PDLIM2-208ENST00000416159 IGHV7-4-1A0A0J9YVY3 117 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 INS-IGF2F8WCM5 200 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 UBE2CO00762 179 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 CHEK1O14757 476 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 GNG7O60262 68 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 JTBO76095 146 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 YIF1AO95070 293 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 RAB3DO95716 219 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
PDLIM2-208ENST00000416159 SNCAP37840 140 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms