RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C5orf24Q7Z6I8 188 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 TMEM183AQ8IXX5 376 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 OR10V1Q8NGI7 309 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 RAB24Q969Q5 203 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 TBL2Q9Y4P3 447 aaKnown RBP11.76□□□□□ -0.53
SGCE-202ENST00000415788 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
SGCE-202ENST00000415788 F8P00451 2351 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 IFNA5P01569 189 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 SSX2Q16385 188 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 HLA-DRB5Q30154 266 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 MINOS1Q5TGZ0 78 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 SLC25A48Q6ZT89 311 aaKnown RBP11.76□□□□□ -0.53
SGCE-202ENST00000415788 C9orf139Q6ZV77 190 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
SGCE-202ENST00000415788 TBC1D26Q86UD7 250 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 HIST1H2BLQ99880 126 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 SSX3Q99909 188 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 MINOS1-NBL1R4GNA1 71 aa11.76□□□□□ -0.53
SGCE-202ENST00000415788 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 BCL2P10415 239 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 UCP1P25874 307 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 GNG10P50151 68 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 RAB7AP51149 207 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 SPCS3P61009 180 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 ODF3L1Q8IXM7 274 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 MBD3L1Q8WWY6 194 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 LEAP2Q969E1 77 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 ACTR3CQ9C0K3 210 aaPredicted RBP11.75□□□□□ -0.53
SGCE-202ENST00000415788 SDF2L1Q9HCN8 221 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 RFNGQ9Y644 331 aa11.75□□□□□ -0.53
SGCE-202ENST00000415788 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 SLC25A6P12236 298 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 HTR1DP28221 377 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 GNRHRP30968 328 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 SAA4P35542 130 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 CEACAM3P40198 252 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 RAB11AP62491 216 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 PMS2P11Q13670 270 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 ZNF124Q15973 351 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 PDZD11Q5EBL8 140 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 UTF1Q5T230 341 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 BRD3OSQ6XYD6 125 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 SRD5A3Q9H8P0 318 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 HIVEP2P31629 2446 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 BUB1B-PAK6H3BSN5 160 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 CST7O76096 145 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 IFNA1P01562 189 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 IGHV3-7P01780 117 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 SRD5A1P18405 259 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 IL3RAP26951 378 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
SGCE-202ENST00000415788 COA6Q5JTJ3 125 aaKnown RBP11.74□□□□□ -0.53
SGCE-202ENST00000415788 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
SGCE-202ENST00000415788 DPM3Q9P2X0 92 aa11.74□□□□□ -0.53
SGCE-202ENST00000415788 MAST4O15021 2626 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 GCGP01275 180 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 EPHA1P21709 976 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 RUNX1Q01196 453 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 FAM53AQ6NSI3 398 aaPredicted RBP11.73□□□□□ -0.53
SGCE-202ENST00000415788 RAB40CQ96S21 281 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 GNG13Q9P2W3 67 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 OR2W1Q9Y3N9 320 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
SGCE-202ENST00000415788 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
SGCE-202ENST00000415788 A0A1W2PRD5 423 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 A0A1W2PRF3 423 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 A0A1W2PRM7 423 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 H0Y980 276 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 CHST1O43916 411 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 TUSC2O75896 110 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 ZNF134P52741 427 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 ZNF137PP52743 207 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 SCGB1C1Q8TD33 95 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 AGMATQ9BSE5 352 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 VAX2Q9UIW0 290 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 A8MWP6 167 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 OOSP1A8MZH6 123 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 CRLF1O75462 422 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 S100GP29377 79 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 SERF2P84101 59 aa11.72□□□□□ -0.53
SGCE-202ENST00000415788 THNSL2Q86YJ6 484 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms