RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 LYNX1P0DP58 116 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 PPT1P50897 306 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 ERVFRD-1P60508 538 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 PRCDQ00LT1 54 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 ZNF506Q5JVG8 444 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 C11orf42Q8N5U0 333 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 RAB1CQ92928 201 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
PTPRC-206ENST00000413409 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 TMA7Q9Y2S6 64 aaKnown RBP13.77□□□□□ -0.21
PTPRC-206ENST00000413409 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 FNDC10F2Z333 226 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 C17orf112F2Z3M2 114 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 KBTBD11O94819 623 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 IGKV1-16P04430 117 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 SAA1P0DJI8 122 aaPredicted RBP13.76□□□□□ -0.21
PTPRC-206ENST00000413409 PMS2P11Q13670 270 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 ABHD12Q8N2K0 398 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 OR5B3Q8NH48 314 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 SFT2D1Q8WV19 159 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 HARBI1Q96MB7 349 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 NPCDR1Q9BY65 106 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 WASHC3Q9Y3C0 194 aa13.76□□□□□ -0.21
PTPRC-206ENST00000413409 NPY1RP25929 384 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 ZFP36P26651 326 aaKnown RBP13.75□□□□□ -0.21
PTPRC-206ENST00000413409 CCL20P78556 96 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 WDR25Q64LD2 544 aaPredicted RBP13.75□□□□□ -0.21
PTPRC-206ENST00000413409 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 LY6G5BQ8NDX9 201 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 BEND2Q8NDZ0 799 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 OR4C13Q8NGP0 309 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 CLDND2Q8NHS1 167 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 UNKLQ9H9P5 680 aaKnown RBP13.75□□□□□ -0.21
PTPRC-206ENST00000413409 KCNIP2Q9NS61 270 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
PTPRC-206ENST00000413409 IGHV2-26A0A0B4J1V2 119 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 LOC102723971A0A1B0GUV8 181 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 hCG_1809904A0A1W2PP81 198 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 A0A1W2PPE2 198 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 A0A1W2PR64 198 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 A0A1W2PRV1 198 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 B4DSR2 109 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 H7C2Y5 167 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 AVPP01185 164 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 HSPB1P04792 205 aaKnown RBP13.74□□□□□ -0.21
PTPRC-206ENST00000413409 CD1BP29016 333 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 MC5RP33032 325 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
PTPRC-206ENST00000413409 FOXL1Q12952 345 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 KHDC3LQ587J8 217 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 ACSM6Q6P461 480 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.74□□□□□ -0.21
PTPRC-206ENST00000413409 OR10G4Q8NGN3 311 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 TMEM167AQ8TBQ9 72 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 TMEM170AQ8WVE7 144 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
PTPRC-206ENST00000413409 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 VSIRQ9H7M9 311 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 PLEKHA3Q9HB20 300 aa13.74□□□□□ -0.21
PTPRC-206ENST00000413409 AMMECR1Q9Y4X0 333 aaPredicted RBP13.74□□□□□ -0.21
PTPRC-206ENST00000413409 PPIAL4CA0A0B4J2A2 164 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 CTXND1A0A1B0GTU2 59 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 A0A1B0GV50 99 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 SRRM4A7MD48 611 aaKnown RBP13.73□□□□□ -0.21
PTPRC-206ENST00000413409 RRHO14718 337 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 IGLV1-47P01700 117 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 PPIAL4GP0DN37 164 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 NPBWR1P48145 328 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 PRRX1P54821 245 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 SCGB2A2Q13296 93 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 ICAM4Q14773 271 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 HLA-DRB5Q30154 266 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 CLRN3Q8NCR9 226 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 LHX4Q969G2 390 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 CLEC7AQ9BXN2 247 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
PTPRC-206ENST00000413409 TET2Q6N021 2002 aaPredicted RBP13.73□□□□□ -0.21
PTPRC-206ENST00000413409 FAM74A7A6NL05 159 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 NDUFS6O75380 124 aaKnown RBP13.72□□□□□ -0.21
PTPRC-206ENST00000413409 IFNA1P01562 189 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 LIPFP07098 398 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 BSXQ3C1V8 233 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 FAM74A3Q4VXF1 159 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 FFAR4Q5NUL3 377 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 Q8N7P7 452 aa13.72□□□□□ -0.21
PTPRC-206ENST00000413409 PATZ1Q9HBE1 687 aaKnown RBP13.72□□□□□ -0.21
PTPRC-206ENST00000413409 LOC105371242A0A075B767 164 aa13.71□□□□□ -0.21
PTPRC-206ENST00000413409 IFNA4P05014 189 aa13.71□□□□□ -0.21
PTPRC-206ENST00000413409 SRP19P09132 144 aaKnown RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 BCL2P10415 239 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms