RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 HIKESHIQ53FT3 197 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 WDR38Q5JTN6 314 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 C12orf73Q69YU5 71 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 FGFBP3Q8TAT2 258 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF703Q9H7S9 590 aaPredicted RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 UBE2D4Q9Y2X8 147 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 SHPRHQ149N8 1683 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 A0A1W2PRE2 83 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 FNDC10F2Z333 226 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 PPYP01298 95 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 DNAJC19Q96DA6 116 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM141Q96I45 108 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 IMMP2LQ96T52 175 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 KNDC1Q76NI1 1749 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 MYF5P13349 255 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 RPL18Q07020 188 aaKnown RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 HIGD2BQ4VC39 106 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 GLIS1Q8NBF1 620 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 ST6GALNAC6Q969X2 333 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3-64DA0A0J9YX35 117 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 MARCH11A6NNE9 402 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CFPP27918 469 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 VEGFBP49765 207 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 EGR4Q05215 589 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 INSL4Q14641 139 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZXDCQ2QGD7 858 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 FAM222AQ5U5X8 452 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 TBC1D29Q9UFV1 150 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PILRAQ9UKJ1 303 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 NINQ8N4C6 2090 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CROCCQ5TZA2 2017 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF134P52741 427 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 LINC00615Q96LM1 132 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SRXN1Q9BYN0 137 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 TSPOAP1O95153 1857 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ATRNO75882 1429 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 VIRMAQ69YN4 1812 aaKnown RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 A0A1W2PPV9 198 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 WNT1P04628 370 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CEND1Q8N111 149 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 RCHY1Q96PM5 261 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 LHX9Q9NQ69 397 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF638Q14966 1978 aaKnown RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SAA2-SAA4A0A096LPE2 208 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 H0Y9J4 135 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 TCL1BO95988 128 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SAA2P0DJI9 122 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CCL3L1P16619 93 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PGFP49763 221 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 LPAL2Q16609 132 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 FAAP20Q6NZ36 180 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 GATA6Q92908 595 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SIGLEC12Q96PQ1 595 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 GAFA1Q96PS6 74 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SF3B5Q9BWJ5 86 aaKnown RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 AURKAIP1Q9NWT8 199 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 DKK4Q9UBT3 224 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SIGLEC7Q9Y286 467 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 DLC1Q96QB1 1528 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 H3BT86 120 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 J3QT63 122 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 RAMP3O60896 148 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PRB2P02812 416 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-202ENST00000411767 IGKV5-2P06315 115 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 TIRAPP58753 221 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 HERVK_113P63121 156 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF721Q8TF20 911 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CARD19Q96LW7 228 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 HCFC1R1Q9NWW0 138 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 RPL36A-HNRNPH2H7BZ11 118 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF493Q6ZR52 646 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PRR7Q8TB68 274 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 SIT1Q9Y3P8 196 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 LRP12Q9Y561 859 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 A0A1W2PPE3 182 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 LINC01553A4QN01 128 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 B5MCH6 92 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 EPPINO95925 133 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 NGFRP08138 427 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ZC2HC1BQ5TFG8 222 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 ISCA2Q86U28 154 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 PLPPR2Q96GM1 343 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CCL19Q99731 98 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 CRIM1Q9NZV1 1036 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 B9D1Q9UPM9 204 aa3.87□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3-21A0A0B4J1V1 117 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 IGLL5B9A064 214 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 SMAD7O15105 426 aaKnown RBP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
PTPN13-202ENST00000411767 BSPH1Q075Z2 132 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
PTPN13-202ENST00000411767 KIR3DX1Q9H7L2 352 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 330.7 ms