RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CLVS1Q8IUQ0 354 aaPredicted RBP2.98□□□□□ -1.93
LSM5-205ENST00000409952 OR9Q1Q8NGQ5 310 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 OR5J2Q8NH18 312 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 LZICQ8WZA0 190 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 HSPB9Q9BQS6 159 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 TM2D3Q9BRN9 247 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 GSKIPQ9P0R6 139 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 NUP160Q12769 1436 aa2.98□□□□□ -1.93
LSM5-205ENST00000409952 ADAMTSL1Q8N6G6 1762 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 DIP2BQ9P265 1576 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 IGKV6D-41A0A0C4DH26 115 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 ARL5CA6NH57 179 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 TRAPPC2LH3BP13 241 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 LEPROTO15243 131 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 C1QAP02745 245 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 LPAR6P43657 344 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H4AP62805 103 aaKnown RBP2.97□□□□□ -1.93
LSM5-205ENST00000409952 RPL18Q07020 188 aaKnown RBP2.97□□□□□ -1.93
LSM5-205ENST00000409952 BAMBIQ13145 260 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 BIKQ13323 160 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 DEFB115Q30KQ5 88 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 Q6P435 159 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 TCEAL4Q96EI5 215 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 C16orf95Q9H693 158 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 LAMTOR3Q9UHA4 124 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 JPT1Q9UK76 154 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 ASB4Q9Y574 426 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 LRP5O75197 1615 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 SMARCA4P51532 1647 aa2.97□□□□□ -1.93
LSM5-205ENST00000409952 LOC102725191A0A1B0GVB3 256 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 UBFD1O14562 309 aaKnown RBP2.96□□□□□ -1.94
LSM5-205ENST00000409952 GADD45GO95257 159 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 NPYP01303 97 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 SRIP30626 198 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 HTR4Q13639 388 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 ZNF660Q6AZW8 331 aaPredicted RBP2.96□□□□□ -1.94
LSM5-205ENST00000409952 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 OR10P1Q8NGE3 313 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 OR5C1Q8NGR4 320 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 SMCR5Q8TEV8 140 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 THEM6Q8WUY1 208 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 SCRT1Q9BWW7 348 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 TTTY13Q9BZ97 58 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 TUBA4BQ9H853 241 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 SPANXCQ9NY87 97 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 PTPRMP28827 1452 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 ABCC10Q5T3U5 1492 aa2.96□□□□□ -1.94
LSM5-205ENST00000409952 SYNJ1O43426 1573 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CEP350Q5VT06 3117 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CHD5Q8TDI0 1954 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 SCRIBQ14160 1630 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 RAPGEF6Q8TEU7 1601 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 TRAV40A0A0B4J280 105 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 GGT3PA6NGU5 568 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 FABP5P3A8MUU1 101 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 BUB1B-PAK6H3BSN5 160 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 ZNF73O43830 326 aaPredicted RBP2.95□□□□□ -1.94
LSM5-205ENST00000409952 SOD1P00441 154 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CD200P41217 278 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 FOXA1P55317 472 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CDC42P60953 191 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 AP1S1P61966 158 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
LSM5-205ENST00000409952 PSPHP78330 225 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 MEF2BQ02080 365 aaPredicted RBP2.95□□□□□ -1.94
LSM5-205ENST00000409952 RRN3P1Q2M238 152 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 SPANXN3Q5MJ09 141 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 ADAT3Q96EY9 351 aaPredicted RBP2.95□□□□□ -1.94
LSM5-205ENST00000409952 CAPZA3Q96KX2 299 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 ZNF285Q96NJ3 590 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CCDC115Q96NT0 180 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 OR2J1Q9GZK6 312 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 TMEM138Q9NPI0 162 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 ASF1BQ9NVP2 202 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 RASL12Q9NYN1 266 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 KLK12Q9UKR0 248 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 CACNA1AO00555 2505 aa2.95□□□□□ -1.94
LSM5-205ENST00000409952 UHRF1BP1Q6BDS2 1440 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 YEATS2Q9ULM3 1422 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 DOCK9Q9BZ29 2069 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 HECW1Q76N89 1606 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 DICER1Q9UPY3 1922 aaKnown RBP2.94□□□□□ -1.94
LSM5-205ENST00000409952 SCN1AP35498 2009 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 IGHV3-15A0A0B4J1V0 119 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 A0A1B0GU33 70 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 C17orf98A8MV24 154 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 TXNDC9O14530 226 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 FAM107AO95990 144 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 OGNP20774 298 aaKnown RBP2.94□□□□□ -1.94
LSM5-205ENST00000409952 S100A4P26447 101 aaKnown RBP2.94□□□□□ -1.94
LSM5-205ENST00000409952 HLA-DMBP28068 263 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 ZNF117Q03924 483 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 MIAQ16674 131 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 ANGPTL5Q86XS5 388 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 TMEM86AQ8N2M4 240 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 Q8NAQ8 132 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 AICDAQ9GZX7 198 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms