RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 IGLV2-14P01704 120 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 CBLN1P23435 193 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 MMDQ15546 238 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 HES4Q9HCC6 221 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 ABCA12Q86UK0 2595 aa11.73□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 RBFOX2O43251 390 aaKnown RBP eCLIP11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
MINDY4-202ENST00000409881 FOXL1Q12952 345 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 Q8NFD4 153 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 KCNS2Q9ULS6 477 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 IGHV4-39P01824 125 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 MSMO1Q15800 293 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 RNF114Q9Y508 228 aa11.72□□□□□ -0.53
MINDY4-202ENST00000409881 RBM7Q9Y580 266 aaKnown RBP11.72□□□□□ -0.53
MINDY4-202ENST00000409881 TFF1P04155 84 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
MINDY4-202ENST00000409881 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
MINDY4-202ENST00000409881 ATP5J2P56134 94 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 OR5AU1Q8NGC0 362 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
MINDY4-202ENST00000409881 PERPQ96FX8 193 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 SFRP2Q96HF1 295 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 SLC35E1Q96K37 410 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 TACC2O95359 2948 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 TANC2Q9HCD6 1990 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 PPIAL4DF5H284 164 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 CD99P14209 185 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 CRISP2P16562 243 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 THBS3P49746 956 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 CIB3Q96Q77 187 aaPredicted RBP11.71□□□□□ -0.53
MINDY4-202ENST00000409881 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
MINDY4-202ENST00000409881 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.53
MINDY4-202ENST00000409881 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
MINDY4-202ENST00000409881 STPG4Q8N801 248 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 ZNF709Q8N972 641 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 WIPI2Q9Y4P8 454 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 POLQO75417 2590 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 SIRPB1O00241 398 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 HAND1O96004 215 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 GABRA2P47869 451 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 KRTDAPP60985 99 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 GCSAMLQ5JQS6 135 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 BAGE3Q86Y29 109 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 BAGE2Q86Y30 109 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 BTF3L4Q96K17 158 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 NPCDR1Q9BY65 106 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
MINDY4-202ENST00000409881 TRBV20OR9-2A0A075B6H5 130 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 F6UZH7 168 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 DEGS1O15121 323 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 NDUFB8O95169 186 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 SELENOTP62341 195 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 ZNF146Q15072 292 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
MINDY4-202ENST00000409881 TRAV38-1A0A0B4J264 116 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 SH2D1BO14796 132 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
MINDY4-202ENST00000409881 TEX36Q5VZQ5 186 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 TIMD4Q96H15 378 aa11.69□□□□□ -0.54
MINDY4-202ENST00000409881 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 PDE6DO43924 150 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 OR2H2O95918 312 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 KRASP01116 189 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 PRDX2P32119 198 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 RBX1P62877 108 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
MINDY4-202ENST00000409881 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms