RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PATZ1Q9HBE1 687 aaKnown RBP6.06□□□□□ -1.44
CXCR4-202ENST00000409817 RPS10P5Q9NQ39 176 aa6.06□□□□□ -1.44
CXCR4-202ENST00000409817 TET2Q6N021 2002 aaPredicted RBP6.06□□□□□ -1.44
CXCR4-202ENST00000409817 A0A087WWC5 75 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 ZFP92A6NM28 416 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 LYNX1G3V0Z9 82 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 BUB1B-PAK6H3BSN5 160 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 TSPAN9O75954 239 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 SOD3P08294 240 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 LYNX1P0DP58 116 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 MAS1LP35410 378 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 GPX4P36969 197 aaPredicted RBP6.05□□□□□ -1.44
CXCR4-202ENST00000409817 RPL29P47914 159 aaKnown RBP6.05□□□□□ -1.44
CXCR4-202ENST00000409817 MEF2BQ02080 365 aaPredicted RBP6.05□□□□□ -1.44
CXCR4-202ENST00000409817 C1orf122Q6ZSJ8 110 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 CBLN2Q8IUK8 224 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 CYB561D1Q8N8Q1 229 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 NANPQ8TBE9 248 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 RNASEH2CQ8TDP1 164 aaKnown RBP6.05□□□□□ -1.44
CXCR4-202ENST00000409817 TVP23CQ96ET8 276 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 GGTLC1Q9BX51 225 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 HINT2Q9BX68 163 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 ZNRD1Q9P1U0 126 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 PRELID1Q9Y255 219 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 MALRD1Q5VYJ5 2156 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 LOC105371267A0A1B0GV96 52 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 A0A1W2PPV4 95 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 H3BQ15 152 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 IGLV2-23P01705 113 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 SNRNP70P08621 437 aaKnown RBP6.05□□□□□ -1.44
CXCR4-202ENST00000409817 REG1BP48304 166 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 AVPI1Q5T686 147 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 FAM122CQ6P4D5 195 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 SSX7Q7RTT5 188 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 MMD2Q8IY49 270 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 MGST2Q99735 147 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 SLC25A22Q9H936 323 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 INSIG2Q9Y5U4 225 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 PXMP4Q9Y6I8 212 aa6.05□□□□□ -1.44
CXCR4-202ENST00000409817 ABCA4P78363 2273 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 IGHV1-3A0A0C4DH29 117 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 CXorf65A6NEN9 183 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 A6NNC1 897 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 MT-CO2P00403 227 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 MT-ND4LP03901 98 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 RNASE2P10153 161 aaKnown RBP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 FOLR2P14207 255 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 IGFBP2P18065 325 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 CEACAM3P40198 252 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 COMPP49747 757 aaPredicted RBP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 FGF8P55075 233 aaPredicted RBP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 B2MP61769 119 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 RHOBP62745 196 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 CD69Q07108 199 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 HNF4GQ14541 408 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 RNF212Q495C1 297 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 FAM90A2PQ658T7 463 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 PNKDQ8N490 385 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 KIR3DL3Q8N743 410 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 OR11H6Q8NGC7 330 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 OR4P4Q8NGL7 312 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 RPEQ96AT9 228 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 SLC35E1Q96K37 410 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 SSBP3Q9BWW4 388 aaPredicted RBP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 SIRT7Q9NRC8 400 aa6.04□□□□□ -1.44
CXCR4-202ENST00000409817 PUS1Q9Y606 427 aaKnown RBP eCLIP6.04□□□□□ -1.44
CXCR4-202ENST00000409817 LOC105371242A0A075B767 164 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 LY6LH3BQJ8 138 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ACTL6BO94805 426 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 YIF1AO95070 293 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 CXorf1O96002 111 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 STAG3L2P0CL84 134 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 STAG3L3P0CL85 134 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 GNLYP22749 145 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 PRTN3P24158 256 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 GPR6P46095 362 aaPredicted RBP6.03□□□□□ -1.44
CXCR4-202ENST00000409817 EFNA4P52798 201 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 DIAPH2-AS1Q14236 149 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ETFRF1Q6IPR1 90 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ZNF114Q8NC26 417 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 SRSF8Q9BRL6 282 aaKnown RBP6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ZNF430Q9H8G1 570 aaPredicted RBP6.03□□□□□ -1.44
CXCR4-202ENST00000409817 TMEM242Q9NWH2 141 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ARL2-SNX15V9GYD0 113 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 NCOR2Q9Y618 2525 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 COL6A6A6NMZ7 2263 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 ATRXP46100 2492 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 HIVEP3Q5T1R4 2406 aa6.03□□□□□ -1.44
CXCR4-202ENST00000409817 TPRP12270 2363 aaKnown RBP6.03□□□□□ -1.44
CXCR4-202ENST00000409817 COLCA2A8K830 154 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 OOSP1A8MZH6 123 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 CORTO00230 105 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 SLC25A17O43808 307 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 PDE6DO43924 150 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 CRYGBP07316 175 aa6.02□□□□□ -1.44
CXCR4-202ENST00000409817 HTR1DP28221 377 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms