RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 ANK3Q12955 4377 aaKnown RBP12.41□□□□□ -0.42
SHANK2-204ENST00000409530 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 BTBD17A6NE02 478 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 OR8H1Q8NGG4 311 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 PINX1Q96BK5 328 aaKnown RBP12.41□□□□□ -0.42
SHANK2-204ENST00000409530 U3KQ87 197 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 IGHV3-21A0A0B4J1V1 117 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 UBE2L5PA0A1B0GUS4 154 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 LINC01548A6NM66 108 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 IGHV3-48P01763 117 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 PRH1P02810 166 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 DEFA5Q01523 94 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 TUSC1Q2TAM9 212 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
SHANK2-204ENST00000409530 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 A0A1W2PN81 502 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 IGLC7A0M8Q6 106 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 A6NDX4 124 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 TEX22C9J3V5 150 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 HNF1AP20823 631 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 CHRNA7P36544 502 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 IER3P46695 156 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 TAS2R30P59541 319 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 BPIFB3P59826 476 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
SHANK2-204ENST00000409530 PDLIM3Q53GG5 364 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-204ENST00000409530 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 TMEM14EPQ6UXP3 125 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 ETV3LQ6ZN32 361 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 HSD17B11Q8NBQ5 300 aa12.4□□□□□ -0.42
SHANK2-204ENST00000409530 GSX1Q9H4S2 264 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-204ENST00000409530 ATP6V0E1O15342 81 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 CFDP00746 253 aaPredicted RBP12.4□□□□□ -0.43
SHANK2-204ENST00000409530 CD99P14209 185 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 C4BPBP20851 252 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 MAS1LP35410 378 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 ALKAL2Q6UX46 152 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 CCDC28AQ8IWP9 274 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 ZNF680Q8NEM1 530 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 LFNGQ8NES3 379 aa12.4□□□□□ -0.43
SHANK2-204ENST00000409530 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.43
SHANK2-204ENST00000409530 LINC00862A6NCI5 91 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 BLCAPP62952 87 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 OR10P1Q8NGE3 313 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 TAF15Q92804 592 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHANK2-204ENST00000409530 MISP3Q96FF7 219 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
SHANK2-204ENST00000409530 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 AMY1AP04745 511 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
SHANK2-204ENST00000409530 RAB11AP62491 216 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 HBG1P69891 147 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 HBG2P69892 147 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
SHANK2-204ENST00000409530 BAXQ07812 192 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 TMEM95Q3KNT9 176 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 Q6ZS46 218 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 P2RX4Q99571 388 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 CYTL1Q9NRR1 136 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
SHANK2-204ENST00000409530 HIVEP2P31629 2446 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 FBXO24O75426 580 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 DEFA4P12838 97 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 RUNX1Q01196 453 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 Q6YL49 198 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 OR5T1Q8NG75 326 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
SHANK2-204ENST00000409530 G3V318 75 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 ATP5SQ99766 215 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 INAFM1C9JVW0 142 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 M6PRP20645 277 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 OPRK1P41145 380 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 MLANAQ16655 118 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-204ENST00000409530 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
SHANK2-204ENST00000409530 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 S4R3C0 116 aa12.37□□□□□ -0.43
SHANK2-204ENST00000409530 MFAP2P55001 183 aa12.36□□□□□ -0.43
SHANK2-204ENST00000409530 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
SHANK2-204ENST00000409530 ASPHD1Q5U4P2 390 aa12.36□□□□□ -0.43
SHANK2-204ENST00000409530 UNQ5815/PRO19632Q6UWF5 114 aa12.36□□□□□ -0.43
SHANK2-204ENST00000409530 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-204ENST00000409530 FGF16O43320 207 aa12.35□□□□□ -0.43
SHANK2-204ENST00000409530 TPT1P13693 172 aaKnown RBP12.35□□□□□ -0.43
SHANK2-204ENST00000409530 SRD5A1P18405 259 aa12.35□□□□□ -0.43
SHANK2-204ENST00000409530 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms