RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MYOD1P15172 320 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 GPX4P36969 197 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 RPL29P47914 159 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 HAGHQ16775 308 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TM4SF20Q53R12 229 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TPTE2P1Q5T6R2 138 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 ACSM6Q6P461 480 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TMEM144Q7Z5S9 345 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 RNASEH2CQ8TDP1 164 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 P2RX4Q99571 388 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 ZNF430Q9H8G1 570 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 GNG13Q9P2W3 67 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 VAX2Q9UIW0 290 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 YLPM1P49750 1951 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 CFAP46Q8IYW2 2715 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 IGHV3-72A0A0B4J1Y9 119 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 LOC102723971A0A1B0GUV8 181 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 A0A1W2PPV4 95 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 SEC14L6B5MCN3 397 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 DNASE2O00115 360 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 NDUFS7O75251 213 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 TSPAN9O75954 239 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 IGKV1D-33P01593 117 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 IGKV1-33P01594 117 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 IGHV2-5P01817 119 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 CRYGBP07316 175 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 SRP19P09132 144 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 OR13C7P0DN81 318 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 RNASE2P10153 161 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 BCL2P10415 239 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 PSMB3P49720 205 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 COMPP49747 757 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 PDLIM4P50479 330 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 HNF4GQ14541 408 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 ICAM4Q14773 271 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 PSG5Q15238 335 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 PRSS8Q16651 343 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 ANKRD39Q53RE8 183 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 ARSJQ5FYB0 599 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 CCDC144NLQ6NUI1 221 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 SLC35E3Q7Z769 313 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 OR10W1Q8NGF6 305 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 RXFP4Q8TDU9 374 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 RITA1Q96K30 269 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 BBC3Q96PG8 261 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 C19orf24Q9BVV8 132 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 SIGLEC9Q9Y336 463 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 RELNP78509 3460 aa5.05□□□□□ -1.6
GTF3C3-202ENST00000409364 TANC2Q9HCD6 1990 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 RAI1Q7Z5J4 1906 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 SPTAN1Q13813 2472 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 TSPAN4O14817 238 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 SNRNP70P08621 437 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 NPBWR1P48145 328 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 CDC34P49427 236 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 FGF8P55075 233 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 LGALS4P56470 323 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 LMO4P61968 165 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 CD69Q07108 199 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 GAMTQ14353 236 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 MINOS1Q5TGZ0 78 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 ETFRF1Q6IPR1 90 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 FAM122CQ6P4D5 195 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 PPP1R27Q86WC6 154 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 NANPQ8TBE9 248 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 MGST2Q99735 147 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 SRSF8Q9BRL6 282 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 GGTLC1Q9BX51 225 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 MANBALQ9NQG1 85 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 SIRT7Q9NRC8 400 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 PXMP4Q9Y6I8 212 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 MINOS1-NBL1R4GNA1 71 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 HCFC1P51610 2035 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 DOCK11Q5JSL3 2073 aa5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-202ENST00000409364 A0A1W2PPI3 338 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 ODF3BA8MYP8 253 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 E7EUB6 86 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 M0R036 132 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 NDUFS8O00217 210 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TIMM23O14925 209 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 NUPL2O15504 423 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 FOXH1O75593 365 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MT-CO2P00403 227 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PRB1P04280 392 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 RPL27AP46776 148 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 DLX1P56177 255 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 B2MP61769 119 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PAX2Q02962 417 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 WT1-ASQ06250 92 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 HABP2Q14520 560 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 RHEBQ15382 184 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MIC13Q5XKP0 118 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SSX7Q7RTT5 188 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 IGFBPL1Q8WX77 278 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 C1orf159Q96HA4 380 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms