RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CATR1Q13166 79 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 PIP4P1Q86T03 277 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF355PQ9NSJ1 428 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 TACC2O95359 2948 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 HELTA6NFD8 242 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 LRRC30A6NM36 301 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 OR2H2O95918 312 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 CYC1P08574 325 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 KCNMB1Q16558 191 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 LRBAP50851 2863 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 PSG7Q13046 419 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 SMIM15Q7Z3B0 74 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 MDP1Q86V88 176 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 MDS2Q8NDY4 140 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 C10orf35Q96D05 121 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 AGMATQ9BSE5 352 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 IL36GQ9NZH8 169 aa10.77□□□□□ -0.68
PTPRN-202ENST00000409251 A0A1W2PS18 150 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 CTSSP25774 331 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 SELENOVP59797 346 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
PTPRN-202ENST00000409251 SELENOTP62341 195 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 COL25A1Q9BXS0 654 aaPredicted RBP10.77□□□□□ -0.69
PTPRN-202ENST00000409251 GAL3ST2Q9H3Q3 398 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 IL36BQ9NZH7 164 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 COX11Q9Y6N1 276 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 H3BTX0 84 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 K7EN84 100 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 APCSP02743 223 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 GALMQ96C23 342 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 MS4A5Q9H3V2 200 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 GP6Q9HCN6 339 aa10.77□□□□□ -0.69
PTPRN-202ENST00000409251 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-202ENST00000409251 MYOD1P15172 320 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 TAAR6Q96RI8 345 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 CA2P00918 260 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 TMEM116Q8NCL8 245 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 M0R1X1 148 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 IGLV3-1P01715 115 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 TYMSP04818 313 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 ZNF138P52744 262 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 TNXAQ16473 311 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 MOB3BQ86TA1 216 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 OR5B3Q8NH48 314 aa10.76□□□□□ -0.69
PTPRN-202ENST00000409251 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 TMEM11P17152 192 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 MEGF9Q9H1U4 602 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 ASH1LQ9NR48 2969 aaKnown RBP10.75□□□□□ -0.69
PTPRN-202ENST00000409251 SLC45A2Q9UMX9 530 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 TANC2Q9HCD6 1990 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 GNG3P63215 75 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
PTPRN-202ENST00000409251 CEACAM21Q3KPI0 293 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 TM4SF20Q53R12 229 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 DUSP13Q9UII6 198 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 A0A087X0K7 114 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 PPIAL4DF5H284 164 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 BPIFB3P59826 476 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 FOXL1Q12952 345 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 TMEM14EPQ6UXP3 125 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 KCNIP2Q9NS61 270 aa10.75□□□□□ -0.69
PTPRN-202ENST00000409251 LSM4Q9Y4Z0 139 aaKnown RBP10.75□□□□□ -0.69
PTPRN-202ENST00000409251 ACACBO00763 2458 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 LOC105371242A0A075B767 164 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 PRR33A8MZF0 331 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 SAP30O75446 220 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 IGLL1P15814 213 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 IBA57Q5T440 356 aaKnown RBP10.74□□□□□ -0.69
PTPRN-202ENST00000409251 C9orf106Q8NAJ2 232 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 RNF212BA8MTL3 300 aa10.74□□□□□ -0.69
PTPRN-202ENST00000409251 LSM10Q969L4 123 aaKnown RBP10.74□□□□□ -0.69
PTPRN-202ENST00000409251 TRAV3A0A0B4J244 114 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 GCHFRP30047 84 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 ERVK-16P61578 105 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 KIR3DL3Q8N743 410 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 OR8B3Q8NGG8 313 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 FNDC4Q9H6D8 234 aaPredicted RBP10.73□□□□□ -0.69
PTPRN-202ENST00000409251 SVEP1Q4LDE5 3571 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 TMEM144Q7Z5S9 345 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 EAF1Q96JC9 268 aaPredicted RBP10.73□□□□□ -0.69
PTPRN-202ENST00000409251 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 HILPDAQ9Y5L2 63 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 CXorf1O96002 111 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 HBZP02008 142 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 APELAP0DMC3 54 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
PTPRN-202ENST00000409251 BLNKQ8WV28 456 aa10.73□□□□□ -0.69
PTPRN-202ENST00000409251 BMPR1BO00238 502 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 HOXC12P31275 282 aa10.72□□□□□ -0.69
PTPRN-202ENST00000409251 GPR12P47775 334 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms