RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 MOB1BQ7L9L4 216 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 OR56B1Q8NGI3 324 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 OR51S1Q8NGJ8 323 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 GINS4Q9BRT9 223 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 URM1Q9BTM9 101 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 TM2D1Q9BX74 207 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 TMEM59Q9BXS4 323 aa9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 CHMP1AQ9HD42 196 aaPredicted RBP9.46□□□□□ -0.9
CHRNA1-203ENST00000409219 A0A0A6YYD4 124 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF320A2RRD8 509 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 MEIS3P1A6NDR6 274 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 FOXI3A8MTJ6 420 aaPredicted RBP9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 IGLL5B9A064 214 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 FABP7O15540 132 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 SSNA1O43805 119 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 CREBL2O60519 120 aaPredicted RBP9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 ATP6V1G1O75348 118 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 IGHV3-23P01764 117 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 HIST1H1DP16402 221 aaKnown RBP9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 NAT1P18440 290 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 CXCL3P19876 107 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 ARL3P36405 182 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 ARL6IP1Q15041 203 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 PRSS8Q16651 343 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 C19orf35Q6ZS72 473 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 BEST4Q8NFU0 473 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 MAP6D1Q9H9H5 199 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 SCP2D1Q9UJQ7 156 aa9.45□□□□□ -0.9
CHRNA1-203ENST00000409219 DISC1C4P0D8 188 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 MFNGO00587 321 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 ANXA7P20073 488 aaKnown RBP9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 MFAP2P55001 183 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 C10orf55Q5SWW7 151 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 LAMTOR1Q6IAA8 161 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 OR4A47Q6IF82 309 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 RAB3CQ96E17 227 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 PRRT1Q99946 306 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 NICN1Q9BSH3 213 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 ELF5Q9UKW6 265 aaPredicted RBP9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 S4R3C0 116 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 LRP1BQ9NZR2 4599 aa9.44□□□□□ -0.9
CHRNA1-203ENST00000409219 SSX5O60225 188 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 SCTP09683 121 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 C8orf88P0DMB2 117 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 GNB3P16520 340 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 CBX5P45973 191 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 TMEM50BP56557 158 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 UBE2KP61086 200 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 NDUFA5Q16718 116 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 UNQ9165/PRO28630Q6UXU0 137 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 TEX45Q8NA69 505 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 C5orf30Q96GV9 206 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 OR2A7Q96R45 310 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 RARRES2Q99969 163 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF436Q9C0F3 470 aaPredicted RBP9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 KCNK7Q9Y2U2 307 aa9.43□□□□□ -0.9
CHRNA1-203ENST00000409219 TRBV6-6A0A0A6YYG2 114 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 SOCS1O15524 211 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 GIPP09681 153 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 GNG2P59768 71 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 VMA21Q3ZAQ7 101 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 Q5BKY6 102 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 RNASE10Q5GAN6 216 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 OR13C8Q8NGS7 320 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 NUDCD2Q8WVJ2 157 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 ASB13Q8WXK3 278 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 GALNT14Q96FL9 552 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 SPIN2AQ99865 258 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 SPIN2BQ9BPZ2 258 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 IFT46Q9NQC8 304 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 SDHAF2Q9NX18 166 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 RDH8Q9NYR8 311 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
CHRNA1-203ENST00000409219 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 M0QYG6 137 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 SNAPC5O75971 98 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 RLN1P04808 185 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 RAP2BP61225 183 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 RTL8BQ17RB0 113 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
CHRNA1-203ENST00000409219 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms