RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GDF15Q99988 308 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 TMEM106BQ9NUM4 274 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 HBDP02042 147 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 ZNF818PQ6ZRF7 136 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 A0A1W2PRD5 423 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 A0A1W2PRF3 423 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 A0A1W2PRM7 423 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 SNAI3Q3KNW1 292 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 LINC00614P0C842 121 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 ZNF708P17019 499 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 C16orf47Q6ZP98 133 aaPredicted RBP10.36□□□□□ -0.75
SHANK2-203ENST00000409161 WNK1Q9H4A3 2382 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 LHX8Q68G74 356 aa10.36□□□□□ -0.75
SHANK2-203ENST00000409161 NDUFA3O95167 84 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 WNT2BQ93097 391 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 SLC25A38Q96DW6 304 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 OR11H4Q8NGC9 324 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 EML5Q05BV3 1969 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 A0A0G2JMZ2 1700 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 LRRC37A2A6NM11 1700 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 LRRC37AA6NMS7 1700 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 A0A1W2PPV9 198 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 F2Z2F3 143 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 H3BUT2 72 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 PLPPR1Q8TBJ4 325 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 PRSS53Q2L4Q9 553 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 SPANXCQ9NY87 97 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 PMS2CLQ68D20 193 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 FAM90A1Q86YD7 464 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 UPK3AO75631 287 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 CT83Q5H943 113 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
SHANK2-203ENST00000409161 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-203ENST00000409161 A0A1W2PPE3 182 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 CCL8P80075 99 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 C1QL4Q86Z23 238 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 GP6Q9HCN6 339 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 TFPI2P48307 235 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 RLFQ13129 1914 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 IGHV3OR16-12A0A075B7B8 117 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 M0R381 172 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 ZNF124Q15973 351 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 COQ2Q96H96 371 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 PLAC1Q9HBJ0 212 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 CCL21O00585 134 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 PRSS12P56730 875 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 DTX2Q86UW9 622 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 TRAV24A0A0B4J272 114 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
SHANK2-203ENST00000409161 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 TM2D1Q9BX74 207 aa10.34□□□□□ -0.75
SHANK2-203ENST00000409161 C1QAP02745 245 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 A0A1W2PRS3 328 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 IFITM2Q01629 132 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 ICAM4Q14773 271 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 OTORQ9NRC9 128 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 MGAMO43451 1857 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 MED13Q9UHV7 2174 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 FAM90A9PA6NNJ1 464 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 HRKO00198 91 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 MYF5P13349 255 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 LILRA6Q6PI73 481 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 PPIAL4CA0A0B4J2A2 164 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 LOC105371267A0A1B0GV96 52 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 IGHV4-39P01824 125 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 MYOD1P15172 320 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 ZNF385AQ96PM9 386 aaKnown RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 BHLHA9Q7RTU4 235 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 RTN4RL2Q86UN3 420 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 TEX45Q8NA69 505 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 RIF1Q5UIP0 2472 aaKnown RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 M0R2P5 195 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 FOXH1O75593 365 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 Q6ZS52 159 aa10.33□□□□□ -0.76
SHANK2-203ENST00000409161 ZPLD1Q8TCW7 415 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms