RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 NDUFA3O95167 84 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 HLA-DRB1P01911 266 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 COMMD1Q8N668 190 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 NPBQ8NG41 125 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 AQP10Q96PS8 301 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 RAB40CQ96S21 281 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
CGREF1-205ENST00000404694 ZNF257Q9Y2Q1 563 aa12.93□□□□□ -0.34
CGREF1-205ENST00000404694 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
CGREF1-205ENST00000404694 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 KANTRA0A1W2PQU2 76 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 RNF222A6NCQ9 220 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 C15orf61A6NNL5 157 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 TSC22D2O75157 780 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 RBMXL2O75526 392 aaKnown RBP12.92□□□□□ -0.34
CGREF1-205ENST00000404694 KBTBD11O94819 623 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 IGLV2-23P01705 113 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 PF4P02776 101 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 IGF1P05019 195 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
CGREF1-205ENST00000404694 RPL23AP62750 156 aaKnown RBP12.92□□□□□ -0.34
CGREF1-205ENST00000404694 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 BEAN1Q3B7T3 259 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 CXorf66Q5JRM2 361 aaPredicted RBP12.92□□□□□ -0.34
CGREF1-205ENST00000404694 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 VKORC1L1Q8N0U8 176 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 TMEM14BQ9NUH8 114 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 OR5AC2Q9NZP5 309 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
CGREF1-205ENST00000404694 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 MAS1LP35410 378 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 P2RY1P47900 373 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 TAS2R30P59541 319 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 SPCS3P61009 180 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 CFHR3Q02985 330 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 IZUMO4Q1ZYL8 232 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 OR5B3Q8NH48 314 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 CIB3Q96Q77 187 aaPredicted RBP12.91□□□□□ -0.34
CGREF1-205ENST00000404694 ZNF580Q9UK33 172 aa12.91□□□□□ -0.34
CGREF1-205ENST00000404694 IGHV7-81A0A0B4J1V7 117 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 TAAR5O14804 337 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 BCL2L11O43521 198 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 SYNGR2O43760 224 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 IFNA7P01567 189 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 CRYGBP07316 175 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 CD33P20138 364 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 AP2S1P53680 142 aaPredicted RBP12.9□□□□□ -0.34
CGREF1-205ENST00000404694 RPL8P62917 257 aaKnown RBP12.9□□□□□ -0.34
CGREF1-205ENST00000404694 PSG5Q15238 335 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 OXLD1Q5BKU9 147 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 KPRPQ5T749 579 aaPredicted RBP12.9□□□□□ -0.34
CGREF1-205ENST00000404694 TEX261Q6UWH6 196 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 MMD2Q8IY49 270 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 WFDC9Q8NEX5 89 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 RCL1Q9Y2P8 373 aaKnown RBP12.9□□□□□ -0.34
CGREF1-205ENST00000404694 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 U3KQ87 197 aa12.9□□□□□ -0.34
CGREF1-205ENST00000404694 RRHO14718 337 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 IGHG4P01861 327 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 RPLP1P05386 114 aaKnown RBP12.89□□□□□ -0.35
CGREF1-205ENST00000404694 HSPE1P61604 102 aaKnown RBP12.89□□□□□ -0.35
CGREF1-205ENST00000404694 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
CGREF1-205ENST00000404694 VAMP2P63027 116 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 FOXE3Q13461 319 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 LCNL1Q6ZST4 164 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 SMIM8Q96KF7 97 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 ARPC5LQ9BPX5 153 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 FBXL15Q9H469 300 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
CGREF1-205ENST00000404694 NUDT19A8MXV4 375 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 SLC25A17O43808 307 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
CGREF1-205ENST00000404694 IFNA17P01571 189 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 ELANEP08246 267 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 RPL12P30050 165 aaKnown RBP12.88□□□□□ -0.35
CGREF1-205ENST00000404694 C8orf86Q6ZUL3 223 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 QTRT1Q9BXR0 403 aaKnown RBP12.88□□□□□ -0.35
CGREF1-205ENST00000404694 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 ZC4H2Q9NQZ6 224 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 OR51B2Q9Y5P1 312 aa12.88□□□□□ -0.35
CGREF1-205ENST00000404694 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
CGREF1-205ENST00000404694 TRAV3A0A0B4J244 114 aa12.87□□□□□ -0.35
CGREF1-205ENST00000404694 SSSCA1O60232 199 aa12.87□□□□□ -0.35
CGREF1-205ENST00000404694 EIF5AP63241 154 aaKnown RBP12.87□□□□□ -0.35
CGREF1-205ENST00000404694 NDPQ00604 133 aa12.87□□□□□ -0.35
CGREF1-205ENST00000404694 PLGLAQ15195 96 aa12.87□□□□□ -0.35
CGREF1-205ENST00000404694 NDUFA5Q16718 116 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms