RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SPINT2O43291 252 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 SNAI2O43623 268 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
SMC1B-202ENST00000404354 GAGE1Q13065 139 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 VWC2Q2TAL6 325 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 IBA57Q5T440 356 aaKnown RBP7.89□□□□□ -1.15
SMC1B-202ENST00000404354 MORN5Q5VZ52 161 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 TMEM136Q6ZRR5 245 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 LYG1Q8N1E2 194 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 FAM173AQ9BQD7 235 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 TNRC6AQ8NDV7 1962 aaKnown RBP7.89□□□□□ -1.15
SMC1B-202ENST00000404354 TOX4O94842 621 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 NPY1RP25929 384 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 DCAF12Q5T6F0 453 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 FBXW9Q5XUX1 488 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 OR9G1Q8NH87 305 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 LRRC29Q8WV35 223 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 CDX2Q99626 313 aaPredicted RBP7.89□□□□□ -1.15
SMC1B-202ENST00000404354 LINC00470Q9BZP3 86 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 SIT1Q9Y3P8 196 aa7.89□□□□□ -1.15
SMC1B-202ENST00000404354 M0R2Z0 102 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 APCSP02743 223 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 TDGF1P13385 188 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 CD177Q8N6Q3 437 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 RND1Q92730 232 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 BCL2L2Q92843 193 aaPredicted RBP7.88□□□□□ -1.15
SMC1B-202ENST00000404354 KCNS1Q96KK3 526 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 NABP2Q9BQ15 211 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 PCED1AQ9H1Q7 454 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 ENY2Q9NPA8 101 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 DMXL1Q9Y485 3027 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 GGTLC3B5MD39 225 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 APELAP0DMC3 54 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 SPRNQ5BIV9 151 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 STUMQ69YW2 141 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 C11orf53Q8IXP5 236 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 Q8IYB0 196 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 OR2Z1Q8NG97 314 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 OR4C5Q8NGB2 326 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 OR2D3Q8NGH3 330 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
SMC1B-202ENST00000404354 SLC45A2Q9UMX9 530 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 CORTO00230 105 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 PYYP10082 97 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 TSPOP30536 169 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 MEOX1P50221 254 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF137PP52743 207 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 LEMD1Q68G75 181 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 DUX4L9Q6RFH8 374 aaPredicted RBP7.88□□□□□ -1.15
SMC1B-202ENST00000404354 WDR82Q6UXN9 313 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 ACP7Q6ZNF0 438 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 OR10W1Q8NGF6 305 aa7.88□□□□□ -1.15
SMC1B-202ENST00000404354 CTRLP40313 264 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 VDAC2P45880 294 aaPredicted RBP7.87□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF138P52744 262 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 MRPL49Q13405 166 aaKnown RBP7.87□□□□□ -1.15
SMC1B-202ENST00000404354 EIF4EBP1Q13541 118 aaPredicted RBP7.87□□□□□ -1.15
SMC1B-202ENST00000404354 C6orf15Q6UXA7 325 aaPredicted RBP7.87□□□□□ -1.15
SMC1B-202ENST00000404354 LINC00173Q6ZV60 143 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 ZBTB34Q8NCN2 500 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 SFXN3Q9BWM7 321 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 CACNA1BQ00975 2339 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 IGKV1OR2-108A0A075B7D4 117 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 IGLL1P15814 213 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 DUSP3P51452 185 aaPredicted RBP7.87□□□□□ -1.15
SMC1B-202ENST00000404354 PRRX1P54821 245 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 CX3CL1P78423 397 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 Q0VG73 95 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 EBLN2Q6P2I7 272 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 OR52E5Q8NH55 327 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 RAB1CQ92928 201 aa7.87□□□□□ -1.15
SMC1B-202ENST00000404354 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 PRDX2P32119 198 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 GNG5P63218 68 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 RAB31Q13636 194 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF766Q5HY98 468 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 OR2T6Q8NHC8 308 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
SMC1B-202ENST00000404354 LOXL4Q96JB6 756 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 OR8B2Q96RD0 313 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 ASCL2Q99929 193 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 MT-CO2P00403 227 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 IGHV1-2P23083 117 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 NRN1LQ496H8 165 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 MORN2Q502X0 79 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF841Q6ZN19 808 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 FAM214BQ7L5A3 538 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 SPATA12Q7Z6I5 190 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 ALKBH7Q9BT30 221 aaPredicted RBP7.86□□□□□ -1.15
SMC1B-202ENST00000404354 GNB1LQ9BYB4 327 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 IGHV3-21A0A0B4J1V1 117 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 MPV17L2Q567V2 206 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 GDF5OSQ5U4N7 250 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms