RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 TMEM189A5PLL7 270 aa11.93□□□□□ -0.5
GABPA-202ENST00000400075 EGR1P18146 543 aa11.93□□□□□ -0.5
GABPA-202ENST00000400075 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
GABPA-202ENST00000400075 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
GABPA-202ENST00000400075 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
GABPA-202ENST00000400075 CLDN34H7C241 214 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 J3QLI3 93 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 GRNP28799 593 aaKnown RBP11.92□□□□□ -0.5
GABPA-202ENST00000400075 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 C19orf24Q9BVV8 132 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 NXF2Q9GZY0 626 aaKnown RBP11.92□□□□□ -0.5
GABPA-202ENST00000400075 IGFBP3P17936 291 aaPredicted RBP11.92□□□□□ -0.5
GABPA-202ENST00000400075 UPK2O00526 184 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 MLNRO43193 412 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 CXCL3P19876 107 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 DLK1P80370 383 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 ZNF329Q86UD4 541 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 PSPNO60542 156 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 SEC11BP0C7V7 166 aa11.92□□□□□ -0.5
GABPA-202ENST00000400075 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
GABPA-202ENST00000400075 CX3CL1P78423 397 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 LHFPL5Q8TAF8 219 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 NUP210Q8TEM1 1887 aaPredicted RBP11.91□□□□□ -0.5
GABPA-202ENST00000400075 UBE2L6O14933 153 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 MELTFP08582 738 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 EFNB3Q15768 340 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 ZNF600Q6ZNG1 722 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 FCN1O00602 326 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 CSN3P07498 182 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 TMEM187Q14656 261 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 TCEAL7Q9BRU2 100 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 RPRMQ9NS64 109 aa11.91□□□□□ -0.5
GABPA-202ENST00000400075 IGHV1-3A0A0C4DH29 117 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 UCP1P25874 307 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 HIST3H3Q16695 136 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
GABPA-202ENST00000400075 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 TRAV14DV4A0A0A6YYC5 116 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 TCAPO15273 167 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 CMC4P56277 68 aaPredicted RBP11.9□□□□□ -0.5
GABPA-202ENST00000400075 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 GAFA1Q96PS6 74 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 LINC01587Q99440 93 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 ETV2O00321 342 aaPredicted RBP11.9□□□□□ -0.5
GABPA-202ENST00000400075 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
GABPA-202ENST00000400075 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 IGKV1D-12P01611 117 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 CD74P04233 296 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 SFTA3P0C7M3 94 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 TMEM116Q8NCL8 245 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 DUX3Q96PT4 197 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 NAT8Q9UHE5 227 aa11.9□□□□□ -0.51
GABPA-202ENST00000400075 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABPA-202ENST00000400075 ZNF660Q6AZW8 331 aaPredicted RBP11.89□□□□□ -0.51
GABPA-202ENST00000400075 LYRM2Q9NU23 88 aaPredicted RBP11.89□□□□□ -0.51
GABPA-202ENST00000400075 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
GABPA-202ENST00000400075 FOXI3A8MTJ6 420 aaPredicted RBP11.89□□□□□ -0.51
GABPA-202ENST00000400075 PRR32B1ATL7 298 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABPA-202ENST00000400075 GALNT14Q96FL9 552 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 A8MWL6 223 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 LINC00305Q7Z4B0 112 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 TRAPPC1Q9Y5R8 145 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 TSC2P49815 1807 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
GABPA-202ENST00000400075 UBE2E1P51965 193 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 RND3P61587 244 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 PAX8Q06710 450 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 RNF5Q99942 180 aa11.89□□□□□ -0.51
GABPA-202ENST00000400075 LRRK2Q5S007 2527 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 TRGV2A0A075B6R0 118 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 IGHV1-69P01742 117 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 TMEM167AQ8TBQ9 72 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 PRORYQ9H606 182 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 RNASEKQ6P5S7 137 aaKnown RBP11.88□□□□□ -0.51
GABPA-202ENST00000400075 MRPL32Q9BYC8 188 aaKnown RBP11.88□□□□□ -0.51
GABPA-202ENST00000400075 SH3BGRL3Q9H299 93 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 SOD3P08294 240 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 RUSC1-AS1Q66K80 236 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 PRSS1P07477 247 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 FABP4P15090 132 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 DUTP33316 252 aaKnown RBP11.88□□□□□ -0.51
GABPA-202ENST00000400075 TXNDC17Q9BRA2 123 aa11.88□□□□□ -0.51
GABPA-202ENST00000400075 TRAF4Q9BUZ4 470 aaPredicted RBP11.88□□□□□ -0.51
GABPA-202ENST00000400075 SEC11CQ9BY50 192 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms