RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 WFDC9Q8NEX5 89 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 OR10W1Q8NGF6 305 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 MS4A10Q96PG2 267 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 FANCD2OSQ96PS1 177 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 P2RX4Q99571 388 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 PLEKHA3Q9HB20 300 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 CACNG5Q9UF02 275 aa13.7□□□□□ -0.22
CTNS-203ENST00000399306 F11RQ9Y624 299 aaKnown RBP13.7□□□□□ -0.22
CTNS-203ENST00000399306 CCL24O00175 119 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 IFNA17P01571 189 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 IL5P05113 134 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 DEFA4P12838 97 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 ERHP84090 104 aaKnown RBP13.69□□□□□ -0.22
CTNS-203ENST00000399306 RHOGP84095 191 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 ZNF343Q6P1L6 599 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 OR2C3Q8N628 320 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 OR1P1Q8NH06 330 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 CASTOR1Q8WTX7 329 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 ATP6V0BQ99437 205 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 HINT2Q9BX68 163 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 GNB4Q9HAV0 340 aa13.69□□□□□ -0.22
CTNS-203ENST00000399306 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 PF4P02776 101 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 ATP5G2Q06055 141 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 C18orf65Q6ZTR6 163 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 RAX2Q96IS3 184 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 CXorf58Q96LI9 332 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 PRR13Q9NZ81 148 aa13.68□□□□□ -0.22
CTNS-203ENST00000399306 TRAV6A0A075B6T7 132 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 PITX3O75364 302 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
CTNS-203ENST00000399306 OR8U8P0C7N1 319 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 ZNF616Q08AN1 781 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
CTNS-203ENST00000399306 ENY2Q9NPA8 101 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 HSPB7Q9UBY9 170 aa13.67□□□□□ -0.22
CTNS-203ENST00000399306 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 PRAF2O60831 178 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 IFNA21P01568 189 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 REG1AP05451 166 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 PVRIGQ6DKI7 326 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 LINC00482Q8N8I6 264 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 OR11H1Q8NG94 326 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 OR1N2Q8NGR9 330 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 VN1R17PQ8TDU5 208 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
CTNS-203ENST00000399306 MARVELD1Q9BSK0 173 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
CTNS-203ENST00000399306 TRBV7-1A0A0A6YYK4 115 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 LINC01619G3V211 115 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 OR2J3O76001 311 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 LY86O95711 162 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 PRH1P02810 166 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 SNCAP37840 140 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTNS-203ENST00000399306 ATP5IP56385 69 aaPredicted RBP13.65□□□□□ -0.22
CTNS-203ENST00000399306 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 DPF1Q92782 380 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 EEF1AKMT3Q96AZ1 226 aa13.65□□□□□ -0.22
CTNS-203ENST00000399306 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
CTNS-203ENST00000399306 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.64□□□□□ -0.23
CTNS-203ENST00000399306 CORTO00230 105 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 NDUFB8O95169 186 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 PTTG1O95997 202 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 ZP3P21754 424 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 HTR2BP41595 481 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
CTNS-203ENST00000399306 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
CTNS-203ENST00000399306 SLC25A24Q6NUK1 477 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 NOXA1Q86UR1 476 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 OR1S1Q8NH92 325 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 DMRT1Q9Y5R6 373 aa13.64□□□□□ -0.23
CTNS-203ENST00000399306 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 MED6O75586 246 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 HOXB5P09067 269 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
CTNS-203ENST00000399306 MCRIP2Q9BUT9 160 aaKnown RBP13.63□□□□□ -0.23
CTNS-203ENST00000399306 GPR61Q9BZJ8 451 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
CTNS-203ENST00000399306 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
CTNS-203ENST00000399306 INMT-MINDY4F8WBC2 141 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 CD33P20138 364 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 FCGR2BP31994 310 aaPredicted RBP13.62□□□□□ -0.23
CTNS-203ENST00000399306 MFAP2P55001 183 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 DEFB136Q30KP8 78 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 C19orf35Q6ZS72 473 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
CTNS-203ENST00000399306 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
CTNS-203ENST00000399306 GAR1Q9NY12 217 aaKnown RBP13.62□□□□□ -0.23
CTNS-203ENST00000399306 IGHV4OR15-8A0A075B7B6 117 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms