RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 RPS11P62280 158 aaKnown RBP eCLIP4.28□□□□□ -1.73
TTC3-204ENST00000399017 GLDNQ6ZMI3 551 aaPredicted RBP4.28□□□□□ -1.73
TTC3-204ENST00000399017 PAQR9Q6ZVX9 377 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 Q6ZWC4 215 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 Q8NFD4 153 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 HIST1H2BAQ96A08 127 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 WDR34Q96EX3 536 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 RCC2Q9P258 522 aaKnown RBP4.28□□□□□ -1.73
TTC3-204ENST00000399017 MRPS18BQ9Y676 258 aaKnown RBP4.28□□□□□ -1.73
TTC3-204ENST00000399017 LINC00312Q9Y6C7 94 aa4.28□□□□□ -1.73
TTC3-204ENST00000399017 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 DIRC3C9JPN6 131 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 RPL36A-HNRNPH2H7BZ11 118 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 NBR2O15453 112 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 GATA4P43694 442 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 DAPP51397 102 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 C21orf62Q9NYP8 219 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ANAPC10Q9UM13 185 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 SIGLEC7Q9Y286 467 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 TIMP3P35625 211 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ZP4Q12836 540 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 LHFPL4Q7Z7J7 247 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 OR5AN1Q8NGI8 311 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ZAR1LA6NP61 321 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CSN3P07498 182 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 GPR183P32249 361 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 BCDIN3DQ7Z5W3 292 aaKnown RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ZNRF1Q8ND25 227 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 MRPL20Q9BYC9 149 aaKnown RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 RNF167Q9H6Y7 350 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 BEX4Q9NWD9 120 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 NEU3Q9UQ49 428 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 DSPPQ9NZW4 1301 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 FAM223BA6NKX1 122 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 PAGE4O60829 102 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CYB5R3P00387 301 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 HOXB3P14651 431 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 OPRL1P41146 370 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 LDLRAD3Q86YD5 345 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 FAM223AQ8IWN6 122 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 THAP8Q8NA92 274 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 PMCHL1Q16048 86 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 C9orf66Q5T8R8 295 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CYB561D1Q8N8Q1 229 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 KCNE3Q9Y6H6 103 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 TRBV5-4A0A0C4DH59 114 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 WISP1O95388 367 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 SRSF6Q13247 344 aaKnown RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 RFLNAQ6ZTI6 216 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 LILRA3Q8N6C8 439 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 SPAG8Q99932 426 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 TSSC4Q9Y5U2 329 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 NRXN3Q9Y4C0 1643 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 TRBV9A0A0B4J1U6 114 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 LOC101059948A0A1B0GTJ6 334 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CTXND1A0A1B0GTU2 59 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CA2P00918 260 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 LCNL1Q6ZST4 164 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 TMEM144Q7Z5S9 345 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 VKORC1L1Q8N0U8 176 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ST6GAL2Q96JF0 529 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CDCA4Q9BXL8 241 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 PARLQ9H300 379 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 F2Z2F3 143 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 SPINK4O60575 86 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 RND2P52198 227 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 ANXA2RQ3ZCQ2 193 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 SPINK9Q5DT21 86 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CLEC19AQ6UXS0 136 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 BHLHA9Q7RTU4 235 aa4.27□□□□□ -1.73
TTC3-204ENST00000399017 CNRIP1Q96F85 164 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 FGF20Q9NP95 211 aaPredicted RBP4.27□□□□□ -1.73
TTC3-204ENST00000399017 LRRC37A2A6NM11 1700 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 LRRC37AA6NMS7 1700 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 IGLV3-25P01717 112 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 FABP4P15090 132 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 FAM3BP58499 235 aaPredicted RBP4.26□□□□□ -1.73
TTC3-204ENST00000399017 EFNB1P98172 346 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 PRCDQ00LT1 54 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 HCP5Q6MZN7 132 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 OR11H7Q8NGC8 314 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 Q96MF0 132 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 ZNF488Q96MN9 340 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 PSMG3Q9BT73 122 aaPredicted RBP4.26□□□□□ -1.73
TTC3-204ENST00000399017 LGALS1P09382 135 aaKnown RBP4.26□□□□□ -1.73
TTC3-204ENST00000399017 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 SSTR5P35346 364 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
TTC3-204ENST00000399017 SPATA31B1PQ5VZV4 182 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 FMC1Q96HJ9 113 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 FBXL7Q9UJT9 491 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 PQLC2LA1A4F0 135 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 INS-IGF2F8WCM5 200 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 H3BMM0 161 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 M0R1W7 72 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 M0R381 172 aa4.26□□□□□ -1.73
TTC3-204ENST00000399017 TGIF1Q15583 401 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms