RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 OR4A16Q8NH70 328 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 MRGPRFQ96AM1 343 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 WDR89Q96FK6 387 aaPredicted RBP10.1□□□□□ -0.79
VCX3A-202ENST00000398729 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
VCX3A-202ENST00000398729 CITED4Q96RK1 184 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 ABHD1Q96SE0 405 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 C21orf62Q9NYP8 219 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 MLXQ9UH92 298 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
VCX3A-202ENST00000398729 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 OR2T8A6NH00 312 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 OR11H12B2RN74 326 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 IGKV1-39P01597 117 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 IGKV1D-39P04432 117 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 MFAP2P55001 183 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 PIGPP57054 158 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 ZFAND6Q6FIF0 208 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 SPSB3Q6PJ21 355 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 SLC16A13Q7RTY0 426 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 LHFPL1Q86WI0 220 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 SCARB1Q8WTV0 552 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 ZNF436Q9C0F3 470 aaPredicted RBP10.09□□□□□ -0.79
VCX3A-202ENST00000398729 MRPL27Q9P0M9 148 aaKnown RBP10.09□□□□□ -0.79
VCX3A-202ENST00000398729 SELENOKQ9Y6D0 94 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 CEPT1Q9Y6K0 416 aa10.09□□□□□ -0.79
VCX3A-202ENST00000398729 IGHV3-21A0A0B4J1V1 117 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 GABARAPH6UMI1 98 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 PI3P19957 117 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 TAS2R19P59542 299 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 SPCS2Q15005 226 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 ANKRD55Q3KP44 614 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 BTNL8Q6UX41 500 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
VCX3A-202ENST00000398729 DEFB125Q8N687 156 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 TMEM229BQ8NBD8 167 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 OR1P1Q8NH06 330 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 ISOC1Q96CN7 298 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 MIXL1Q9H2W2 232 aa10.08□□□□□ -0.8
VCX3A-202ENST00000398729 TRAV25A0A0B4J276 109 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 K7EIM0 57 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 CTDSP2O14595 271 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 ATG12O94817 140 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 RAB3DO95716 219 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 CD74P04233 296 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 PPP5CP53041 499 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 MRPS10P82664 201 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 PRCDQ00LT1 54 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 SSBP1Q04837 148 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 SCGB2B2Q4G0G5 96 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 Q56UQ5 140 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 STEAP1BQ6NZ63 245 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 RBPMS2Q6ZRY4 209 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 OR2C3Q8N628 320 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 UBAC2Q8NBM4 344 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 OR4D10Q8NGI6 311 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 OR52B4Q8NGK2 314 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 RAB2BQ8WUD1 216 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 TMEM190Q8WZ59 177 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 SRD5A3Q9H8P0 318 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
VCX3A-202ENST00000398729 COPZ2Q9P299 210 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 FRAS1Q86XX4 4008 aa10.07□□□□□ -0.8
VCX3A-202ENST00000398729 C3orf85A0A1B0GTC6 90 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 NDUFA4O00483 81 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 AKR1C2P52895 323 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 ZNF114Q8NC26 417 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 MISP3Q96FF7 219 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 C20orf24Q9BUV8 137 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 HIPK2Q9H2X6 1198 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
VCX3A-202ENST00000398729 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 NUPL2O15504 423 aaKnown RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 TMBIM6P55061 237 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 MFAP4P55083 255 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 MEF2DQ14814 521 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 TRIM16LQ309B1 348 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 OR13C8Q8NGS7 320 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 BCL7BQ9BQE9 202 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 CHRDL1Q9BU40 450 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 PDCD10Q9BUL8 212 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 RABL2AQ9UBK7 228 aaPredicted RBP10.05□□□□□ -0.8
VCX3A-202ENST00000398729 RABL2BQ9UNT1 228 aa10.05□□□□□ -0.8
VCX3A-202ENST00000398729 I3L2K1 104 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms