RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CISD2Q8N5K1 135 aaKnown RBP15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 OR1L6Q8NGR2 347 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 ZCCHC14Q8WYQ9 949 aaKnown RBP15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 NEIL1Q96FI4 390 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 C1orf159Q96HA4 380 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 GGTLC1Q9BX51 225 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 FUT9Q9Y231 359 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 PXMP4Q9Y6I8 212 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 CEP295Q9C0D2 2601 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 S100A7P31151 101 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 THBS3P49746 956 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 SELENOTP62341 195 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 TMEM108Q6UXF1 575 aa15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 AURKAIP1Q9NWT8 199 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-202ENST00000397827 CBY3A6NI87 242 aa15.02■□□□□ -0
CHRFAM7A-202ENST00000397827 IGKV1-16P04430 117 aa15.02■□□□□ -0
CHRFAM7A-202ENST00000397827 OPRK1P41145 380 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TMEM204Q9BSN7 226 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RAB9BQ9NP90 201 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TMEM14BQ9NUH8 114 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ARFGEF3Q5TH69 2177 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 DPRXA6NFQ7 191 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 C16orf97H3BN30 126 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 MPDU1O75352 247 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PFN1P07737 140 aaKnown RBP15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TMPRSS3P57727 454 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 HSPE1P61604 102 aaKnown RBP15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SLC24A4Q8NFF2 622 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RND1Q92730 232 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 MS4A10Q96PG2 267 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 DERL1Q9BUN8 251 aa15.02□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TRGV8A0A0C4DH27 118 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 H7BYZ3 331 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PRRG2O14669 202 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ARL14EPLP0DKL9 152 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CD33P20138 364 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 NPY1RP25929 384 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CA2P00918 260 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 GNB1P62873 340 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 BSPH1Q075Z2 132 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ADIPOQQ15848 244 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TOMM20LQ6UXN7 152 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 NUP37Q8NFH4 326 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 GSX1Q9H4S2 264 aaPredicted RBP15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 NPVFQ9HCQ7 196 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 FOXA2Q9Y261 457 aaPredicted RBP15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PAM16Q9Y3D7 125 aa15.01□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SRRM4A7MD48 611 aaKnown RBP15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CT45A6P0DMU7 189 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CT45A5P0DMU8 189 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CT45A7P0DMV0 189 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 GALR1P47211 349 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RAB1CQ92928 201 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SLC35E1Q96K37 410 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RPUSD1Q9UJJ7 312 aaKnown RBP15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 C20orf144Q9BQM9 153 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ENY2Q9NPA8 101 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 LSM4Q9Y4Z0 139 aaKnown RBP15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 OR51B2Q9Y5P1 312 aa15□□□□□ -0.01
CHRFAM7A-202ENST00000397827 NDUFB4O95168 129 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TEX36Q5VZQ5 186 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SLC25A48Q6ZT89 311 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PCGF1Q9BSM1 259 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PGPEP1LA6NFU8 196 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 THBDP07204 575 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CCL3L1P16619 93 aa14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SEPSECSQ9HD40 501 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CHTOPQ9Y3Y2 248 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RELNP78509 3460 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 C17orf100A8MU93 164 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 HRASP01112 189 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SPATA31B1PQ5VZV4 182 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ADTRPQ96IZ2 230 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 OR5B12Q96R08 314 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 ALKBH7Q9BT30 221 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SLC35D1Q9NTN3 355 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SLC25A10Q9UBX3 287 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 hADV38S2A0JD32 116 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 K7EP13 123 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 FCN3O75636 299 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 STAG3L2P0CL84 134 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 STAG3L3P0CL85 134 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TEPPQ6URK8 271 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CORO2AQ92828 525 aa14.98□□□□□ -0.01
CHRFAM7A-202ENST00000397827 J3QR06 171 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 NDUFB8O95169 186 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 TNFRSF1AP19438 455 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 CHRNA7P36544 502 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 SMIM15Q7Z3B0 74 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 MOB3BQ86TA1 216 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 STPG3Q8N7X2 389 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 Q8NA96 180 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 LINC00574Q9H8X3 128 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 POLEQ07864 2286 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 A0A1B0GUS0 222 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 IGFBP2P18065 325 aa14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 RPL31P62899 125 aaKnown RBP14.97□□□□□ -0.01
CHRFAM7A-202ENST00000397827 MMDQ15546 238 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms