RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SNRNP70P08621 437 aaKnown RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 TRBV9A0A0B4J1U6 114 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 S1PR2O95136 353 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 TFF3Q07654 80 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 PSMG4Q5JS54 123 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 C11orf71Q6IPW1 123 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 DPF1Q92782 380 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 EIF5A2Q9GZV4 153 aaKnown RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 SOX21Q9Y651 276 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 SAA2-SAA4A0A096LPE2 208 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 SAA2P0DJI9 122 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 KLHDC1Q8N7A1 406 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ZCCHC14Q8WYQ9 949 aaKnown RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 NABP2Q9BQ15 211 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 TRBV7-9A0A0J9YWB2 115 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM89A2RUT3 159 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 E7EQL1 145 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 DLL1O00548 723 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 METTL15P1P0C7V9 234 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 FOXL1Q12952 345 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 OR8G2PQ6IF36 304 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 F8P00451 2351 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 XKRY2A2RUG3 117 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 LINC00473A8K010 186 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 DVL1O14640 695 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 FAM3BP58499 235 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ADORA2A-AS1P86434 159 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 AVPI1Q5T686 147 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 FAM231DQ6ZW35 169 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 H3BUA1 57 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 OR5G3P0C626 314 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 NHLH2Q02577 135 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF787Q6DD87 383 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 LYG1Q8N1E2 194 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF383Q8NA42 475 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 SFT2D1Q8WV19 159 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 H0YJW9 148 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 OVOL3O00110 214 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 CST7O76096 145 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 NDUFB8O95169 186 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 RAB5AP20339 215 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 BRICD5Q6PL45 260 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF562Q6V9R5 426 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 C11orf42Q8N5U0 333 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A10P0DMU9 189 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 ID4P47928 161 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 TCTAP57738 103 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 PRSS8Q16651 343 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 TVP23CQ96ET8 276 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 RBKSQ9H477 322 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 YIF1AO95070 293 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 AGFG2O95081 481 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 CYB5R3P00387 301 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 F12P00748 615 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 EGR1P18146 543 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 SPANXN5Q5MJ07 72 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 TREML4Q6UXN2 200 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 ZNRF1Q8ND25 227 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 WFDC12Q8WWY7 111 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 HIST1H2BAQ96A08 127 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 DMXL2Q8TDJ6 3036 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 WNT9BO14905 357 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 SPRY3O43610 288 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 HOXA1P49639 335 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 PLPPR2Q96GM1 343 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 GGTLC1Q9BX51 225 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 HIF1ANQ9NWT6 349 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM14CQ9P0S9 112 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 PITPNC1Q9UKF7 332 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 CSN1S1P47710 185 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 YPEL3P61236 119 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF430Q9H8G1 570 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 RPL27AP46776 148 aaKnown RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 B2MP61769 119 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
PTPRD-206ENST00000397617 TCF23Q7RTU1 214 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 ODF3L1Q8IXM7 274 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 CMTM2Q8TAZ6 248 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 RAB24Q969Q5 203 aa4.78□□□□□ -1.64
PTPRD-206ENST00000397617 SFTA3P0C7M3 94 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 CCL8P80075 99 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 PPP1R27Q86WC6 154 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 NPBQ8NG41 125 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 ACY3Q96HD9 319 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 LINC00052Q96N35 136 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 HRH4Q9H3N8 390 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 FCGR3BO75015 233 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 NDFIP1Q9BT67 221 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 KMT2BQ9UMN6 2715 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 A0A0G2JRQ6 117 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 ODF3BA8MYP8 253 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 SMAGPQ0VAQ4 97 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms