RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TXN2Q99757 166 aa12.86□□□□□ -0.35
EXOSC3-202ENST00000396521 CHRDL1Q9BU40 450 aa12.86□□□□□ -0.35
EXOSC3-202ENST00000396521 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
EXOSC3-202ENST00000396521 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
EXOSC3-202ENST00000396521 IGHV7-4-1A0A0J9YVY3 117 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 CBX5P45973 191 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 ALDH3B2P48448 385 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 NANOS2P60321 138 aaKnown RBP12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 Q56UQ5 140 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 APRG1Q8IVJ8 170 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 OR10C1Q96KK4 312 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 RNF2Q99496 336 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 FBXL17Q9UF56 701 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
EXOSC3-202ENST00000396521 K7EIM0 57 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 CHEK1O14757 476 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 DFFBO76075 338 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 CTSGP08311 255 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 F2RP25116 425 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 SDC2P34741 201 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 RPL5P46777 297 aaKnown RBP12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 TMEM187Q14656 261 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 GPR107Q5VW38 600 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 TSC22D3Q99576 134 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
EXOSC3-202ENST00000396521 TRAV14DV4A0A0A6YYC5 116 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 F8W735 103 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 GABARAPO95166 117 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 HERV-K104P61576 105 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 CENPSQ8N2Z9 138 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 GINS3Q9BRX5 216 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 HINT2Q9BX68 163 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 OR51B2Q9Y5P1 312 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 HECTD4Q9Y4D8 3996 aa12.83□□□□□ -0.36
EXOSC3-202ENST00000396521 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 TMEM127O75204 238 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 YIF1AO95070 293 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 TGFBR1P36897 503 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 MFAP2P55001 183 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 MFAP4P55083 255 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 FXYD4P59646 89 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 NCS1P62166 190 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 CLVS1Q8IUQ0 354 aaPredicted RBP12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 CMTM1Q8IZ96 169 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 LGALS14Q8TCE9 139 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 DIABLOQ9NR28 239 aa12.82□□□□□ -0.36
EXOSC3-202ENST00000396521 C15orf61A6NNL5 157 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 EIF4EP06730 217 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 CLEC2LP0C7M8 214 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 GNRHRP30968 328 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 TMEM17Q86X19 198 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 GVQW1Q8N7I0 195 aa12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 NXF2Q9GZY0 626 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-202ENST00000396521 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 KRASP01116 189 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 VBP1P61758 197 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 PRR20EP86478 221 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 PRR20CP86479 221 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 PRR20DP86480 221 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 PRR20BP86481 221 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 PRR20AP86496 221 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 DUSP18Q8NEJ0 188 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 NAA50Q9GZZ1 169 aaKnown RBP12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 AUNIPQ9H7T9 357 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 FAM212BQ9NTI7 297 aaPredicted RBP12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 APLNQ9ULZ1 77 aa12.8□□□□□ -0.36
EXOSC3-202ENST00000396521 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 IGLL5B9A064 214 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 PTHLHP12272 177 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 TFPI2P48307 235 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 RAB2BQ8WUD1 216 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 TMEM231Q9H6L2 316 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 TMEM14BQ9NUH8 114 aa12.79□□□□□ -0.36
EXOSC3-202ENST00000396521 CCDC160A6NGH7 325 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 S100GP29377 79 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 LPAR6P43657 344 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms